Crystal Structure of Vibrio cholerae ATPase GspsE Hexamer
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| F | SCOP2 Family | Hcp1-like | 8101210 | 4001941 | SCOP2 (2022-06-29) |
| F | SCOP2 Superfamily | T6SS-like | 8101211 | 3000580 | SCOP2 (2022-06-29) |
| F | SCOP2B Superfamily | T2SE N-terminal domain-like | 8056592 | 3002353 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056593 | 3002019 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056593 | 3002019 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | T2SE N-terminal domain-like | 8056592 | 3002353 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | T6SS-like | 8101211 | 3000580 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | T6SS-like | 8101211 | 3000580 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056593 | 3002019 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | T2SE N-terminal domain-like | 8056592 | 3002353 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | T2SE N-terminal domain-like | 8056592 | 3002353 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | T6SS-like | 8101211 | 3000580 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056593 | 3002019 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | T6SS-like | 8101211 | 3000580 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | T2SE N-terminal domain-like | 8056592 | 3002353 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056593 | 3002019 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | T6SS-like | 8101211 | 3000580 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056593 | 3002019 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | T2SE N-terminal domain-like | 8056592 | 3002353 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| F | Tubulin | e4kssF1 | A: a/b three-layered sandwiches | X: PRTase-like | H: PRTase-like | T: PRTase-like | F: Tubulin | ECOD (v294.1) |
| E | Tubulin | e4kssE1 | A: a/b three-layered sandwiches | X: PRTase-like | H: PRTase-like | T: PRTase-like | F: Tubulin | ECOD (v294.1) |
| D | Tubulin | e4kssD1 | A: a/b three-layered sandwiches | X: PRTase-like | H: PRTase-like | T: PRTase-like | F: Tubulin | ECOD (v294.1) |
| C | Tubulin | e4kssC1 | A: a/b three-layered sandwiches | X: PRTase-like | H: PRTase-like | T: PRTase-like | F: Tubulin | ECOD (v294.1) |
| B | Tubulin | e4kssB1 | A: a/b three-layered sandwiches | X: PRTase-like | H: PRTase-like | T: PRTase-like | F: Tubulin | ECOD (v294.1) |
| A | Tubulin | e4kssA1 | A: a/b three-layered sandwiches | X: PRTase-like | H: PRTase-like | T: PRTase-like | F: Tubulin | ECOD (v294.1) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR036624 | Hcp1-like superfamily | Homologous Superfamily | |
| IPR053165 | HSI-I assembly protein Hcp1 | Family | |
| IPR008514 | Type VI secretion system effector Hcp | Domain | |
| IPR037257 | Type II secretion system protein GspE, N-terminal superfamily | Homologous Superfamily | |
| IPR013369 | Type II secretion system protein GspE | Family | |
| IPR054757 | Type II secretion system protein E, N1E domain | Domain | |
| IPR001482 | Type II/IV secretion system domain | Domain | |
| IPR003593 | AAA+ ATPase domain | Domain | |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |














