4KF8 | pdb_00004kf8

Nup188(aa1445-1827) from Myceliophthora thermophila

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Nup188_C	e4kf8A1	A: a/b three-layered sandwiches	X: Repetitive alpha hairpins	H: ARM repeat	T: ARM repeat	F: Nup188_C	ECOD (v294.1)
B	CBM_6	e4kf8B1	A: a/b three-layered sandwiches	X: PBZ domain	H: PBZ domain	T: PBZ domain	F: CBM_6	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	1.25.10.70	Mainly Alpha	Alpha Horseshoe	Leucine-rich Repeat Variant		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF18378	Nuclear pore protein NUP188 C-terminal domain (Nup188_C)	Nuclear pore protein NUP188 C-terminal domain	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Nup188	structural molecule activity structural constituent of nuclear pore	establishment of protein localization cellular localization nucleocytoplasmic transport transport nuclear transport intracellular transport protein localization to nucleus establishment of localization localization intercellular transport import into nucleus establishment of protein localization to organelle protein transport establishment of localization in cell macromolecule localization establishment of protein localization cellular localization nucleocytoplasmic transport transport nuclear transport intracellular transport protein localization to nucleus establishment of localization localization intercellular transport import into nucleus establishment of protein localization to organelle protein transport establishment of localization in cell macromolecule localization protein localization to organelle protein import into nucleus cellular process intracellular protein localization intracellular protein transport RNA transport nitrogen compound transport nucleic acid transport mRNA transport establishment of RNA localization RNA localization nucleobase-containing compound transport RNA export from nucleus nuclear export	nuclear pore inner ring membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR048883	Nucleoporin Nup188, N-terminal subdomain III	Domain
A, B	IPR044840	Nucleoporin Nup188	Family
A, B	IPR018864	Nucleoporin Nup188, N-terminal	Domain
A, B	IPR041634	Nuclear pore protein Nup188, C-terminal	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.