Crystal structure of a tartrate dehydratase from azospirillum, target efi-502395, with bound mg and a putative acrylate ion, ordered active site
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d4kemb2 | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Enolase C-terminal domain-like | automated matches | automated matches | (Azospirillum sp. B510 ) [TaxId: 137722 ], | SCOPe (2.08) |
| B | d4kemb1 | Alpha and beta proteins (a+b) | Enolase N-terminal domain-like | Enolase N-terminal domain-like | automated matches | automated matches | (Azospirillum sp. B510 ) [TaxId: 137722 ], | SCOPe (2.08) |
| A | d4kema2 | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Enolase C-terminal domain-like | automated matches | automated matches | (Azospirillum sp. B510 ) [TaxId: 137722 ], | SCOPe (2.08) |
| A | d4kema1 | Alpha and beta proteins (a+b) | Enolase N-terminal domain-like | Enolase N-terminal domain-like | automated matches | automated matches | (Azospirillum sp. B510 ) [TaxId: 137722 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | SH3_1 | e4kemB1 | A: alpha arrays | X: Major vault protein (MVP) structural repeat domain | H: Major vault protein (MVP) structural repeat domain | T: Major vault protein (MVP) structural repeat domain | F: SH3_1 | ECOD (v295.2) |
| A | DHR-2_Lobe_A | e4kemA1 | A: alpha arrays | X: SSHS domain | H: Class II aaRS and biotin synthetases | T: NADH-quinone oxidoreductase subunit 8 (Nqo8)-related | F: DHR-2_Lobe_A | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.30.390.10 | Alpha Beta | 2-Layer Sandwich | Enolase-like | domain 1 | CATH (4.3.0) |
| B | 3.20.20.120 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Enolase-like C-terminal domain | CATH (4.3.0) |
| A | 3.30.390.10 | Alpha Beta | 2-Layer Sandwich | Enolase-like | domain 1 | CATH (4.3.0) |
| A | 3.20.20.120 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Enolase-like C-terminal domain | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Mandelate racemase/muconate lactonizing enzyme |
| - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR034593 | D-galactonate dehydratase DgoD-like | Family | |
| IPR029017 | Enolase-like, N-terminal | Homologous Superfamily | |
| IPR034611 | D-tartrate dehydratase | Family | |
| IPR036849 | Enolase-like, C-terminal domain superfamily | Homologous Superfamily | |
| IPR013342 | Mandelate racemase-like, C-terminal domain | Domain |