X-ray crystal structure of a heavy metal efflux pump, crystal form II
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Nup160 | e4k0eA1 | A: a/b three-layered sandwiches | X: YrdC/RibB | H: YrdC/RibB | T: YrdC/RibB | F: Nup160 | ECOD (v294.1) |
| B | Inositol_P | e4k0eB2 | A: a/b three-layered sandwiches | X: amino-terminal domain of OmpATb | H: amino-terminal domain of OmpATb | T: amino-terminal domain of OmpATb | F: Inositol_P | ECOD (v294.1) |
| B | Alpha_E2_glycop | e4k0eB9 | A: a/b three-layered sandwiches | X: Transmembrane heme-binding four-helical bundle | H: Anticodon-binding domain of Class II aaRS | T: Anticodon-binding domain of Class II aaRS | F: Alpha_E2_glycop | ECOD (v294.1) |
| C | RNase_T | e4k0eC1 | A: a/b three-layered sandwiches | X: alpha/beta-Hydrolases | H: alpha/beta-Hydrolases | T: alpha/beta-Hydrolases | F: RNase_T | ECOD (v294.1) |
| C | Alpha_E2_glycop | e4k0eC7 | A: a/b three-layered sandwiches | X: Transmembrane heme-binding four-helical bundle | H: Anticodon-binding domain of Class II aaRS | T: Anticodon-binding domain of Class II aaRS | F: Alpha_E2_glycop | ECOD (v294.1) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00873 | AcrB/AcrD/AcrF family (ACR_tran) | AcrB/AcrD/AcrF family | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Heavy metal cation tricomponent efflux pump ZneA(CzcA-like) | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR001036 | Acriflavin resistance protein | Family | |
| IPR027463 | Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains | Homologous Superfamily | |
| IPR004763 | Cation efflux system CusA-like | Family |
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Transmembrane | Alpha-helical polytopic | Resistance-nodulation-cell division | Hydrophobe/amphiphile efflux-1 family |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| MemProtMD | Annotated as membrane protein by MemProtMD |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
| Chains | Resource Link | Group | Subgroup | Protein |
|---|---|---|---|---|
| mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Multi-Drug Efflux Transporters | ZneA Zn(II)/proton antiporter |
