Selection of specific protein binders for pre-defined targets from an optimized library of artificial helicoidal repeat proteins (alphaRep)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | PI_PP_I | e4jw3B1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PI_PP_I | ECOD (v294.1) |
| A | PI_PP_I | e4jw3A1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PI_PP_I | ECOD (v294.1) |
| D | Sigma70_r2,Sigma70_ner | e4jw3D1 | A: a/b three-layered sandwiches | X: TIM beta/alpha-barrel | H: TIM barrels | T: TIM barrels | F: Sigma70_r2,Sigma70_ner | ECOD (v294.1) |
| C | PI_PP_I | e4jw3C1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PI_PP_I | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 2.60.40.230 | Mainly Beta | Sandwich | Immunoglobulin-like | Neocarzinostatin-like | CATH (4.3.0) |
| A | 2.60.40.230 | Mainly Beta | Sandwich | Immunoglobulin-like | Neocarzinostatin-like | CATH (4.3.0) |
| D | 1.25.10.10 | Mainly Alpha | Alpha Horseshoe | Leucine-rich Repeat Variant | Leucine-rich Repeat Variant | CATH (4.3.0) |
| C | 1.25.10.10 | Mainly Alpha | Alpha Horseshoe | Leucine-rich Repeat Variant | Leucine-rich Repeat Variant | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Neocarzinostatin | - | |||
| Alpha-helical artificial proteins | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR027273 | Neocarzinostatin-like superfamily | Homologous Superfamily | |
| IPR002186 | Neocarzinostatin-like | Family |














