Crystal structure of pput_1285, a putative hydroxyproline epimerase from Pseudomonas putida f1 (target EFI-506500), open form, space group P212121, bound sulfate
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B [auth D] | d4jd7d1 | Alpha and beta proteins (a+b) | Diaminopimelate epimerase-like | Diaminopimelate epimerase-like | automated matches | automated matches | (Pseudomonas putida F1 ) [TaxId: 351746 ], | SCOPe (2.08) |
| B [auth D] | d4jd7d2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Pseudomonas putida F1 ) [TaxId: 351746 ], | SCOPe (2.08) |
| A | d4jd7a1 | Alpha and beta proteins (a+b) | Diaminopimelate epimerase-like | Diaminopimelate epimerase-like | automated matches | automated matches | (Pseudomonas putida F1 ) [TaxId: 351746 ], | SCOPe (2.08) |
| A | d4jd7a2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Pseudomonas putida F1 ) [TaxId: 351746 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B [auth D] | CoV_NSP4_C | e4jd7D3 | A: a/b three-layered sandwiches | X: DEATH domain | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: CoV_NSP4_C | ECOD (v294.1) |
| A | Tubulin | e4jd7A3 | A: a/b three-layered sandwiches | X: POZ domain | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: Tubulin | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B [auth D] | 3.10.310.10 | Alpha Beta | Roll | Diaminopimelate Epimerase | Chain A, domain 1 | CATH (4.3.0) |
| A | 3.10.310.10 | Alpha Beta | Roll | Diaminopimelate Epimerase | Chain A, domain 1 | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| A, B [auth D] | Proline racemase | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| A, B [auth D] | IPR008794 | Proline racemase family | Family |
