Crystal Structure of the Conserved Hypothetical Protein MJ0927 from Methanocaldococcus jannaschii (in C2221 form)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | d4iwgc_ | Alpha and beta proteins (a/b) | NIF3 (NGG1p interacting factor 3)-like | NIF3 (NGG1p interacting factor 3)-like | automated matches | automated matches | (Methanocaldococcus jannaschii DSM 2661 ) [TaxId: 243232 ], | SCOPe (2.08) |
| B | d4iwgb_ | Alpha and beta proteins (a/b) | NIF3 (NGG1p interacting factor 3)-like | NIF3 (NGG1p interacting factor 3)-like | automated matches | automated matches | (Methanocaldococcus jannaschii DSM 2661 ) [TaxId: 243232 ], | SCOPe (2.08) |
| A | d4iwga_ | Alpha and beta proteins (a/b) | NIF3 (NGG1p interacting factor 3)-like | NIF3 (NGG1p interacting factor 3)-like | automated matches | automated matches | (Methanocaldococcus jannaschii DSM 2661 ) [TaxId: 243232 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| C | SCOP2B Superfamily | NIF3-like | 8076253 | 3001101 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | NIF3-like | 8076253 | 3001101 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | NIF3-like | 8076252 | 4001220 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | NIF3-like | 8076253 | 3001101 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | EryCIII-like_N | e4iwgC1 | A: a/b three-layered sandwiches | X: Rubredoxin-like | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: EryCIII-like_N | ECOD (v294.1) |
| B | EryCIII-like_N | e4iwgB1 | A: a/b three-layered sandwiches | X: Rubredoxin-like | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: EryCIII-like_N | ECOD (v294.1) |
| A | EryCIII-like_N | e4iwgA1 | A: a/b three-layered sandwiches | X: Rubredoxin-like | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: EryCIII-like_N | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C | 3.40.1390.30 | Alpha Beta | 3-Layer(aba) Sandwich | Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase | Chain: A, domain 1 | CATH (4.3.0) |
| B | 3.40.1390.30 | Alpha Beta | 3-Layer(aba) Sandwich | Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase | Chain: A, domain 1 | CATH (4.3.0) |
| A | 3.40.1390.30 | Alpha Beta | 3-Layer(aba) Sandwich | Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase | Chain: A, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01784 | Duf34/NIF3 (NGG1p interacting factor 3) (DUF34_NIF3) | Duf34/NIF3 (NGG1p interacting factor 3) | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| UPF0135 protein MJ0927 | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR002678 | DUF34/NIF3 | Family | |
| IPR036069 | DUF34/NIF3 superfamily | Homologous Superfamily |
