Structure of transcription factor DksA2 from Pseudomonas aeruginosa
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | Rrf2 | e4ijjC1 | A: a/b three-layered sandwiches | X: beta-Grasp | H: HTH | T: winged helix domain | F: Rrf2 | ECOD (v294.1) |
| B | HTH_3 | e4ijjB1 | A: a/b three-layered sandwiches | X: Ribonuclease H-like | H: Ribonuclease H-like | T: Ribonuclease H-like | F: HTH_3 | ECOD (v294.1) |
| A | Rrf2 | e4ijjA1 | A: a/b three-layered sandwiches | X: beta-Grasp | H: HTH | T: winged helix domain | F: Rrf2 | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C | 1.20.120.910 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | DksA, coiled-coil domain | CATH (4.3.0) |
| B | 1.20.120.910 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | DksA, coiled-coil domain | CATH (4.3.0) |
| A | 1.20.120.910 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | DksA, coiled-coil domain | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Putative C4-type zinc finger protein, DksA/TraR family |
|
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR037187 | DksA, N-terminal domain superfamily | Homologous Superfamily | |
| IPR000962 | Zinc finger, DksA/TraR C4-type | Domain | |
| IPR048489 | DnaK suppressor protein DksA, N-terminal domain | Domain | |
| IPR012784 | RNA polymerase-binding transcription factor DksA | Family |














