Crystal structure of the SmcHead bound to the C-winged helix domain of ScpA
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | Polysacc_synt_2,Polysacc_syn_2C | e4i99C1 | A: a/b three-layered sandwiches | X: jelly-roll | H: Galactose-binding domain-like | T: Galactose-binding domain-like | F: Polysacc_synt_2,Polysacc_syn_2C | ECOD (v294.1) |
| B | Thymidylat_synt | e4i99B1 | A: a/b three-layered sandwiches | X: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 | H: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 | T: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 | F: Thymidylat_synt | ECOD (v294.1) |
| A | e4i99A1 | A: a/b three-layered sandwiches | X: omega toxin-like | H: omega toxin-related | T: omega toxin-related | F: | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| D | 1.10.10.580 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Structural maintenance of chromosome 1. Chain E | CATH (4.3.0) |
| C | 1.10.10.580 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Structural maintenance of chromosome 1. Chain E | CATH (4.3.0) |
| B | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
| A | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF02463 | RecF/RecN/SMC N terminal domain (SMC_N) | RecF/RecN/SMC N terminal domain | This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. Th ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR003768 | Segregation and condensation protein A | Family | |
| IPR023093 | ScpA-like, C-terminal | Homologous Superfamily | |
| IPR010935 | SMCs flexible hinge | Domain | |
| IPR036277 | SMCs flexible hinge superfamily | Homologous Superfamily | |
| IPR003395 | RecF/RecN/SMC, N-terminal | Domain | |
| IPR024704 | Structural maintenance of chromosomes protein | Family | |
| IPR011890 | Structural maintenance of chromosomes protein, prokaryotic | Family | |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |














