4HPM
PCGF1 Ub fold (RAWUL)/BCORL1 PUFD Complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C | SCOP2B Superfamily | Putative DNA-binding domain | 8055979 | 3000158 | SCOP2B (2022-06-29) |
A | SCOP2 Family | PUFD-like | 8045762 | 4004669 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Putative DNA-binding domain | 8055979 | 3000158 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Ubiquitin-like | 8055978 | 3000157 | SCOP2B (2022-06-29) |
D | SCOP2 Family | RAWUL domain-like | 8045109 | 4004294 | SCOP2 (2022-06-29) |
D | SCOP2 Superfamily | Ubiquitin-like | 8055978 | 3000157 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | PF16553 | e4hpmC2 | A: alpha arrays | X: HTH | H: HTH | T: Putative DNA-binding domain | F: PF16553 | ECOD (1.6) |
A | PF16553 | e4hpmA1 | A: alpha arrays | X: HTH | H: HTH | T: Putative DNA-binding domain | F: PF16553 | ECOD (1.6) |
B | PF16207 | e4hpmB2 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: PF16207 | ECOD (1.6) |
D | PF16207 | e4hpmD3 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: PF16207 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C | 3.10.260.40 | Alpha Beta | Roll | Mlu1-box Binding Protein | DNA-binding Domain | CATH (4.3.0) |
A | 3.10.260.40 | Alpha Beta | Roll | Mlu1-box Binding Protein | DNA-binding Domain | CATH (4.3.0) |
B | 3.10.20.90 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Phosphatidylinositol 3-kinase Catalytic Subunit | CATH (4.3.0) |
D | 3.10.20.90 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Phosphatidylinositol 3-kinase Catalytic Subunit | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF16553 | BCORL-PCGF1-binding domain (PUFD) | BCORL-PCGF1-binding domain | PUFD is the minimal domain at the C-terminus of BCORL (BCL6 corepressor) that is needed for binding and giving specificity to some of the PCGF proteins, polycomb-group RING finger homologues. PUFD binds to the RAWUL (RING finger- and WD40-associated ... | Domain | |
PF16207 | RAWUL domain RING finger- and WD40-associated ubiquitin-like (RAWUL) | RAWUL domain RING finger- and WD40-associated ubiquitin-like | The RAWUL domain is found at the C-terminus of poly-comb group RING finger proteins. It is a ubiquitin-like domain [1]. RAWUL binds directly to PUFD, a domain on BCOR proteins (BCL6 corepressor). BCOR has emerged as an important player in developm ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR032365 | BCL-6 corepressor, PCGF1 binding domain | Domain | |
IPR002110 | Ankyrin repeat | Repeat | |
IPR047144 | BCL-6 corepressor-like | Family | |
IPR036770 | Ankyrin repeat-containing domain superfamily | Homologous Superfamily | |
IPR038227 | PCGF Ub-like fold discriminator superfamily | Homologous Superfamily | |
IPR017907 | Zinc finger, RING-type, conserved site | Conserved Site | |
IPR032443 | RAWUL domain | Domain | |
IPR013083 | Zinc finger, RING/FYVE/PHD-type | Homologous Superfamily | |
IPR001841 | Zinc finger, RING-type | Domain |