Annotations: 4HN8

Crystal structure of a putative D-glucarate dehydratase from Pseudomonas mendocina ymp

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
H	d4hn8h2	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Enolase C-terminal domain-like	automated matches	automated matches	(Ectopseudomonas mendocina ymp ) [TaxId: 399739 ],	SCOPe (2.08)
H	d4hn8h1	Alpha and beta proteins (a+b)	Enolase N-terminal domain-like	Enolase N-terminal domain-like	automated matches	automated matches	(Ectopseudomonas mendocina ymp ) [TaxId: 399739 ],	SCOPe (2.08)
G	d4hn8g1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Enolase C-terminal domain-like	automated matches	automated matches	(Ectopseudomonas mendocina ymp ) [TaxId: 399739 ],	SCOPe (2.08)
F	d4hn8f1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Enolase C-terminal domain-like	automated matches	automated matches	(Ectopseudomonas mendocina ymp ) [TaxId: 399739 ],	SCOPe (2.08)
E	d4hn8e1	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Enolase C-terminal domain-like	automated matches	automated matches	(Ectopseudomonas mendocina ymp ) [TaxId: 399739 ],	SCOPe (2.08)
D	d4hn8d2	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Enolase C-terminal domain-like	automated matches	automated matches	(Ectopseudomonas mendocina ymp ) [TaxId: 399739 ],	SCOPe (2.08)
D	d4hn8d1	Alpha and beta proteins (a+b)	Enolase N-terminal domain-like	Enolase N-terminal domain-like	automated matches	automated matches	(Ectopseudomonas mendocina ymp ) [TaxId: 399739 ],	SCOPe (2.08)
C	d4hn8c2	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Enolase C-terminal domain-like	automated matches	automated matches	(Ectopseudomonas mendocina ymp ) [TaxId: 399739 ],	SCOPe (2.08)
C	d4hn8c1	Alpha and beta proteins (a+b)	Enolase N-terminal domain-like	Enolase N-terminal domain-like	automated matches	automated matches	(Ectopseudomonas mendocina ymp ) [TaxId: 399739 ],	SCOPe (2.08)
B	d4hn8b2	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Enolase C-terminal domain-like	automated matches	automated matches	(Ectopseudomonas mendocina ymp ) [TaxId: 399739 ],	SCOPe (2.08)
B	d4hn8b1	Alpha and beta proteins (a+b)	Enolase N-terminal domain-like	Enolase N-terminal domain-like	automated matches	automated matches	(Ectopseudomonas mendocina ymp ) [TaxId: 399739 ],	SCOPe (2.08)
A	d4hn8a2	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Enolase C-terminal domain-like	automated matches	automated matches	(Ectopseudomonas mendocina ymp ) [TaxId: 399739 ],	SCOPe (2.08)
A	d4hn8a1	Alpha and beta proteins (a+b)	Enolase N-terminal domain-like	Enolase N-terminal domain-like	automated matches	automated matches	(Ectopseudomonas mendocina ymp ) [TaxId: 399739 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	AHSA1	e4hn8H3	A: beta barrels	X: Fusion glycoprotein F2	H: HTH	T: winged helix domain	F: AHSA1	ECOD (v294.2)
G	AHSA1	e4hn8G3	A: beta barrels	X: Fusion glycoprotein F2	H: HTH	T: winged helix domain	F: AHSA1	ECOD (v294.2)
F	AHSA1	e4hn8F3	A: beta barrels	X: Fusion glycoprotein F2	H: HTH	T: winged helix domain	F: AHSA1	ECOD (v294.2)
E	AHSA1	e4hn8E3	A: beta barrels	X: Fusion glycoprotein F2	H: HTH	T: winged helix domain	F: AHSA1	ECOD (v294.2)
D	AHSA1	e4hn8D3	A: beta barrels	X: Fusion glycoprotein F2	H: HTH	T: winged helix domain	F: AHSA1	ECOD (v294.2)
C	AHSA1	e4hn8C3	A: beta barrels	X: Fusion glycoprotein F2	H: HTH	T: winged helix domain	F: AHSA1	ECOD (v294.2)
B	AHSA1	e4hn8B3	A: beta barrels	X: Fusion glycoprotein F2	H: HTH	T: winged helix domain	F: AHSA1	ECOD (v294.2)
A	NDK	e4hn8A1	A: beta barrels	X: Globin-like	H: Nucleoside diphosphate kinases	T: Nucleoside diphosphate kinases	F: NDK	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
H	3.30.390.10	Alpha Beta	2-Layer Sandwich	Enolase-like	domain 1	CATH (4.3.0)
H	3.20.20.120	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Enolase-like C-terminal domain	CATH (4.3.0)
G	3.30.390.10	Alpha Beta	2-Layer Sandwich	Enolase-like	domain 1	CATH (4.3.0)
G	3.20.20.120	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Enolase-like C-terminal domain	CATH (4.3.0)
F	3.30.390.10	Alpha Beta	2-Layer Sandwich	Enolase-like	domain 1	CATH (4.3.0)
F	3.20.20.120	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Enolase-like C-terminal domain	CATH (4.3.0)
E	3.30.390.10	Alpha Beta	2-Layer Sandwich	Enolase-like	domain 1	CATH (4.3.0)
E	3.20.20.120	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Enolase-like C-terminal domain	CATH (4.3.0)
D	3.30.390.10	Alpha Beta	2-Layer Sandwich	Enolase-like	domain 1	CATH (4.3.0)
D	3.20.20.120	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Enolase-like C-terminal domain	CATH (4.3.0)
C	3.30.390.10	Alpha Beta	2-Layer Sandwich	Enolase-like	domain 1	CATH (4.3.0)
C	3.20.20.120	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Enolase-like C-terminal domain	CATH (4.3.0)
B	3.30.390.10	Alpha Beta	2-Layer Sandwich	Enolase-like	domain 1	CATH (4.3.0)
B	3.20.20.120	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Enolase-like C-terminal domain	CATH (4.3.0)
A	3.30.390.10	Alpha Beta	2-Layer Sandwich	Enolase-like	domain 1	CATH (4.3.0)
A	3.20.20.120	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Enolase-like C-terminal domain	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	D-glucarate dehydratase	hydro-lyase activity glucarate dehydratase activity lyase activity catalytic activity carbon-oxygen lyase activity cation binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR034593	D-galactonate dehydratase DgoD-like	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR029065	Enolase_C-like	Unknown
A, B, C, D, E A, B, C, D, E, F, G, H	IPR034598	D-Glucarate dehydratase-like	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR013342	Mandelate racemase, C-terminal domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR029017	Enolase-like, N-terminal	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR036849	Enolase-like, C-terminal domain superfamily	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.