4H9D | pdb_00004h9d

Crystal Structure of Mn-dependent Gme HNH nicking endonuclease from Geobacter metallireducens GS-15, Northeast Structural Genomics Consortium (NESG) Target GmR87

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CRrf2e4h9dC1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: Rrf2ECOD (v294.1)
BRrf2e4h9dB1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: Rrf2ECOD (v294.1)
AHNHe4h9dA1 A: a/b three-layered sandwichesX: F-box domainH: F-box domainT: F-box domainF: HNHECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C1.10.30.50 Mainly Alpha Orthogonal Bundle DNA Binding (I), subunit A CATH (4.3.0)
B1.10.30.50 Mainly Alpha Orthogonal Bundle DNA Binding (I), subunit A CATH (4.3.0)
A1.10.30.50 Mainly Alpha Orthogonal Bundle DNA Binding (I), subunit A CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF01844HNH endonuclease (HNH)HNH endonuclease- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
HNH endonuclease - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR052892Nucleic_acid-targeting_endonucleaseFamily
A, B, C
IPR003615HNH nucleaseDomain
A, B, C
IPR002711HNH endonucleaseDomain