4GZ8 | pdb_00004gz8

Mouse Semaphorin 3A, domains Sema-PSI-IG

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilySema domain-like 8038490 3000180 SCOP2B (2022-06-29)
ASCOP2B SuperfamilySema domain-like 8038490 3000180 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BMethyltr_RsmB-Fe4gz8B1 A: alpha bundlesX: amino-terminal domain of OmpATbH: amino-terminal domain of OmpATbT: amino-terminal domain of OmpATbF: Methyltr_RsmB-FECOD (develop294)
AMethyltr_RsmB-Fe4gz8A1 A: alpha bundlesX: amino-terminal domain of OmpATbH: amino-terminal domain of OmpATbT: amino-terminal domain of OmpATbF: Methyltr_RsmB-FECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.130.10.10 Mainly Beta 7 Propeller Methylamine Dehydrogenase Chain HCATH (4.3.0)
B3.30.1680.10 Alpha Beta 2-Layer Sandwich ligand-binding face of the semaphorins, domain 2 ligand-binding face of the semaphorins, domain 2CATH (4.3.0)
A2.130.10.10 Mainly Beta 7 Propeller Methylamine Dehydrogenase Chain HCATH (4.3.0)
A3.30.1680.10 Alpha Beta 2-Layer Sandwich ligand-binding face of the semaphorins, domain 2 ligand-binding face of the semaphorins, domain 2CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF01403Sema domain (Sema)Sema domain- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Semaphorin-3A

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR042820Semaphorin-3A, sema domainDomain
A, B
IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
A, B
IPR003599Immunoglobulin domain subtypeDomain
A, B
IPR041416IL-1Ra-like, immunoglobulin domainDomain
A, B
IPR013783Immunoglobulin-like foldHomologous Superfamily
A, B
IPR036352Sema domain superfamilyHomologous Superfamily
A, B
IPR007110Immunoglobulin-like domainDomain
A, B
IPR016201PSI domainDomain
A, B
IPR027231SemaphorinFamily
A, B
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
A, B
IPR001627Sema domainDomain