Crystallographic structure analysis of urease from Jack bean (Canavalia ensiformis) at 1.49 A Resolution
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | PLN02303_like,Urease_beta | e4gy7A1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Urease, beta-subunit (From Topology) | T: Urease, beta-subunit | F: PLN02303_like,Urease_beta | ECOD (1.6) |
| A | Urease_alpha | e4gy7A5 | A: beta sandwiches | X: Composite domain of metallo-dependent hydrolases (From Topology) | H: Composite domain of metallo-dependent hydrolases (From Topology) | T: Composite domain of metallo-dependent hydrolases | F: Urease_alpha | ECOD (1.6) |
| A | Urease_gamma | e4gy7A6 | A: a+b two layers | X: Urease, gamma-subunit (From Topology) | H: Urease, gamma-subunit (From Topology) | T: Urease, gamma-subunit | F: Urease_gamma | ECOD (1.6) |
| A | Amidohydro_1_N | e4gy7A7 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Amidohydro_1_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.30.280.10 | Alpha Beta | 2-Layer Sandwich | Urease | subunit A | CATH (4.2.0) |
| A | 2.30.40.10 | Mainly Beta | Roll | Urease, subunit C | domain 1 | CATH (4.2.0) |
| A | 2.10.150.10 | Mainly Beta | Ribbon | Urease, subunit B | Urease, beta subunit | CATH (4.2.0) |
| A | 3.20.20.140 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Metal-dependent hydrolases | CATH (4.2.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR029754 | Urease nickel binding site | Binding Site | |
| IPR017950 | Urease active site | Active Site | |
| IPR040881 | Urease subunit beta-alpha, linker domain | Domain | |
| IPR008221 | Urease | Family | |
| IPR006680 | Amidohydrolase-related | Domain | |
| IPR011059 | Metal-dependent hydrolase, composite domain superfamily | Homologous Superfamily | |
| IPR032466 | Metal-dependent hydrolase | Homologous Superfamily | |
| IPR036463 | Urease, gamma subunit superfamily | Homologous Superfamily | |
| IPR011612 | Urease alpha-subunit, N-terminal domain | Domain | |
| IPR002019 | Urease, beta subunit-like | Family | |
| IPR036461 | Urease, beta subunit superfamily | Homologous Superfamily | |
| IPR050112 | Urease Alpha Subunit | Family | |
| IPR005848 | Urease, alpha subunit | Family | |
| IPR002026 | Urease, gamma/gamma-beta subunit | Family | |
| IPR017951 | Urease alpha subunit, C-terminal | Domain |














