4GVX | pdb_00004gvx

Crystal structure of a short chain dehydrogenase homolog (target EFI-505321) from burkholderia multivorans, with bound NADP and L-fucose

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Dd4gvxd_ Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains automated matches automated matches (Burkholderia multivorans ATCC 17616 ) [TaxId: 395019 ], SCOPe (2.08)
Cd4gvxc_ Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains automated matches automated matches (Burkholderia multivorans ATCC 17616 ) [TaxId: 395019 ], SCOPe (2.08)
Bd4gvxb_ Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains automated matches automated matches (Burkholderia multivorans ATCC 17616 ) [TaxId: 395019 ], SCOPe (2.08)
Ad4gvxa_ Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains automated matches automated matches (Burkholderia multivorans ATCC 17616 ) [TaxId: 395019 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilySDR-like 8080861 3000038 SCOP2B (2022-06-29)
CSCOP2B SuperfamilySDR-like 8080861 3000038 SCOP2B (2022-06-29)
BSCOP2B SuperfamilySDR-like 8080861 3000038 SCOP2B (2022-06-29)
ASCOP2B SuperfamilySDR-like 8080861 3000038 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DV-sete4gvxD1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: V-setECOD (v294.1)
CV-sete4gvxC1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: V-setECOD (v294.1)
BV-sete4gvxB1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: V-setECOD (v294.1)
AAldo_ket_rede4gvxA1 A: a/b three-layered sandwichesX: Globin-likeH: Nucleoside diphosphate kinasesT: Nucleoside diphosphate kinasesF: Aldo_ket_redECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)
C3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)
B3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)
A3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF13561Enoyl-(Acyl carrier protein) reductase (adh_short_C2)Enoyl-(Acyl carrier protein) reductaseThis domain is found in Enoyl-(Acyl carrier protein) reductases. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
3-oxoacyl-[acyl-carrier protein] reductase - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR036291NAD(P)-binding domain superfamilyHomologous Superfamily
A, B, C, D
IPR002347Short-chain dehydrogenase/reductase SDRFamily