Crystal structure of a noncanonic maltogenic alpha-amylase AmyB from Thermotoga neapolitana
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Rrf2 | e4gklB2 | A: beta barrels | X: beta-Grasp | H: HTH | T: winged helix domain | F: Rrf2 | ECOD (v294.2) |
| B | RPA43_OB | e4gklB3 | A: beta barrels | X: PH domain-like | H: PH domain-like | T: PH domain-like | F: RPA43_OB | ECOD (v294.2) |
| A | Alpha-amylase | e4gklA1 | A: beta barrels | X: Ribonuclease H-like | H: Ribonuclease H-like | T: Ribonuclease H-like | F: Alpha-amylase | ECOD (v294.2) |
| A | Porphobil_deamC | e4gklA2 | A: beta barrels | X: Ribonuclease H-like | H: Ribonuclease H-like | T: Ribonuclease H-like | F: Porphobil_deamC | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
| B | 2.60.40.1180 | Mainly Beta | Sandwich | Immunoglobulin-like | Golgi alpha-mannosidase II | CATH (4.3.0) |
| A | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
| A | 2.60.40.1180 | Mainly Beta | Sandwich | Immunoglobulin-like | Golgi alpha-mannosidase II | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Alpha-amylase | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
| IPR006047 | Glycosyl hydrolase family 13, catalytic domain | Domain | |
| IPR013780 | Glycosyl hydrolase, all-beta | Homologous Superfamily | |
| IPR055067 | Alpha-amylase-like, C-terminal | Domain |














