4GFC
N-terminal coiled-coil dimer of C.elegans SAS-6, crystal form B
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | XRCC4 N-terminal domain-like | 8051830 | 3001319 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e4gfcA4 | A: beta barrels | X: XRCC4, N-terminal domain-like | H: XRCC4, N-terminal domain (From Topology) | T: XRCC4, N-terminal domain | F: F_UNCLASSIFIED | ECOD (1.6) |
A | F_UNCLASSIFIED | e4gfcA2 | A: alpha arrays | X: HTH | H: HTH | T: HTH motif inserted in other structures | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF21503 | e4gfcA3 | A: alpha duplicates or obligate multimers | X: XRCC4 C-terminal oligomerization domain (From Topology) | H: XRCC4 C-terminal oligomerization domain (From Topology) | T: XRCC4 C-terminal oligomerization domain | F: PF21503 | ECOD (1.6) |
B | F_UNCLASSIFIED | e4gfcB1 | A: beta barrels | X: XRCC4, N-terminal domain-like | H: XRCC4, N-terminal domain (From Topology) | T: XRCC4, N-terminal domain | F: F_UNCLASSIFIED | ECOD (1.6) |
B | F_UNCLASSIFIED | e4gfcB2 | A: alpha arrays | X: HTH | H: HTH | T: HTH motif inserted in other structures | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF21503 | e4gfcB3 | A: alpha duplicates or obligate multimers | X: XRCC4 C-terminal oligomerization domain (From Topology) | H: XRCC4 C-terminal oligomerization domain (From Topology) | T: XRCC4 C-terminal oligomerization domain | F: PF21503 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.170.210.20 | Mainly Beta | Beta Complex | Dna Repair Protein Xrcc4 | Chain: A, domain 1 | CATH (4.3.0) |
B | 2.170.210.20 | Mainly Beta | Beta Complex | Dna Repair Protein Xrcc4 | Chain: A, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF16531 | Centriolar protein SAS N-terminal (SAS-6_N) | Centriolar protein SAS N-terminal | SAS-6_N is the N-terminal domain of the SAS-6 centriolar protein, both in C.elegans and in humans. The N-terminal domain is the region through which the 9 rod-shaped homodimers that SAS-6 forms on oligomerisation interact with each other. Proper func ... | Domain | |
PF21503 | Centriolar protein SAS, helical domain (Sas-6_helical) | Centriolar protein SAS, helical domain | This domain is found in Spindle assembly abnormal protein 6 from Caenorhabditis elegans (Sas-6), which is essential for centriole formation. This domain is C-terminal to Pfam:PF16531. It shows an alpha-helical conformation [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR048600 | Spindle assembly abnormal protein 6, helical domain | Domain | |
IPR038558 | SAS-6, N-terminal domain superfamily | Homologous Superfamily | |
IPR032396 | Spindle assembly abnormal protein 6, N-terminal | Domain |