4GF5 | pdb_00004gf5

Crystal Structure of Calicheamicin Methyltransferase, CalS11

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
T	d4gf5t_	Alpha and beta proteins (a/b)	S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	TylF O-methyltransferase-like	automated matches	(Micromonospora echinospora ) [TaxId: 1877 ],	SCOPe (2.08)
S	d4gf5s_	Alpha and beta proteins (a/b)	S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	TylF O-methyltransferase-like	automated matches	(Micromonospora echinospora ) [TaxId: 1877 ],	SCOPe (2.08)
R	d4gf5r_	Alpha and beta proteins (a/b)	S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	TylF O-methyltransferase-like	automated matches	(Micromonospora echinospora ) [TaxId: 1877 ],	SCOPe (2.08)
Q	d4gf5q_	Alpha and beta proteins (a/b)	S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	TylF O-methyltransferase-like	automated matches	(Micromonospora echinospora ) [TaxId: 1877 ],	SCOPe (2.08)
P	d4gf5p_	Alpha and beta proteins (a/b)	S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	TylF O-methyltransferase-like	automated matches	(Micromonospora echinospora ) [TaxId: 1877 ],	SCOPe (2.08)
O	d4gf5o_	Alpha and beta proteins (a/b)	S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	TylF O-methyltransferase-like	automated matches	(Micromonospora echinospora ) [TaxId: 1877 ],	SCOPe (2.08)
N	d4gf5n_	Alpha and beta proteins (a/b)	S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	TylF O-methyltransferase-like	automated matches	(Micromonospora echinospora ) [TaxId: 1877 ],	SCOPe (2.08)
M	d4gf5m_	Alpha and beta proteins (a/b)	S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	TylF O-methyltransferase-like	automated matches	(Micromonospora echinospora ) [TaxId: 1877 ],	SCOPe (2.08)
L	d4gf5l_	Alpha and beta proteins (a/b)	S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	TylF O-methyltransferase-like	automated matches	(Micromonospora echinospora ) [TaxId: 1877 ],	SCOPe (2.08)
K	d4gf5k_	Alpha and beta proteins (a/b)	S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	TylF O-methyltransferase-like	automated matches	(Micromonospora echinospora ) [TaxId: 1877 ],	SCOPe (2.08)
J	d4gf5j_	Alpha and beta proteins (a/b)	S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	TylF O-methyltransferase-like	automated matches	(Micromonospora echinospora ) [TaxId: 1877 ],	SCOPe (2.08)
I	d4gf5i_	Alpha and beta proteins (a/b)	S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	TylF O-methyltransferase-like	automated matches	(Micromonospora echinospora ) [TaxId: 1877 ],	SCOPe (2.08)
H [auth G]	d4gf5g_	Alpha and beta proteins (a/b)	S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	TylF O-methyltransferase-like	automated matches	(Micromonospora echinospora ) [TaxId: 1877 ],	SCOPe (2.08)
G [auth D]	d4gf5d_	Alpha and beta proteins (a/b)	S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	TylF O-methyltransferase-like	automated matches	(Micromonospora echinospora ) [TaxId: 1877 ],	SCOPe (2.08)
F [auth B]	d4gf5b_	Alpha and beta proteins (a/b)	S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	TylF O-methyltransferase-like	automated matches	(Micromonospora echinospora ) [TaxId: 1877 ],	SCOPe (2.08)
E [auth H]	d4gf5h_	Alpha and beta proteins (a/b)	S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	TylF O-methyltransferase-like	automated matches	(Micromonospora echinospora ) [TaxId: 1877 ],	SCOPe (2.08)
D [auth F]	d4gf5f_	Alpha and beta proteins (a/b)	S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	TylF O-methyltransferase-like	automated matches	(Micromonospora echinospora ) [TaxId: 1877 ],	SCOPe (2.08)
C [auth E]	d4gf5e_	Alpha and beta proteins (a/b)	S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	TylF O-methyltransferase-like	automated matches	(Micromonospora echinospora ) [TaxId: 1877 ],	SCOPe (2.08)
B [auth C]	d4gf5c_	Alpha and beta proteins (a/b)	S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	TylF O-methyltransferase-like	automated matches	(Micromonospora echinospora ) [TaxId: 1877 ],	SCOPe (2.08)
A	d4gf5a_	Alpha and beta proteins (a/b)	S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	TylF O-methyltransferase-like	automated matches	(Micromonospora echinospora ) [TaxId: 1877 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
T	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8090801	3000118	SCOP2B (2022-06-29)
S	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8090801	3000118	SCOP2B (2022-06-29)
R	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8090801	3000118	SCOP2B (2022-06-29)
Q	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8090801	3000118	SCOP2B (2022-06-29)
P	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8090801	3000118	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8090801	3000118	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8090801	3000118	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8090801	3000118	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8090801	3000118	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8090801	3000118	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8090801	3000118	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8090801	3000118	SCOP2B (2022-06-29)
H [auth G]	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8090801	3000118	SCOP2B (2022-06-29)
G [auth D]	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8090801	3000118	SCOP2B (2022-06-29)
F [auth B]	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8090801	3000118	SCOP2B (2022-06-29)
E [auth H]	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8090801	3000118	SCOP2B (2022-06-29)
D [auth F]	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8090801	3000118	SCOP2B (2022-06-29)
C [auth E]	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8090801	3000118	SCOP2B (2022-06-29)
B [auth C]	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8090801	3000118	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8090801	3000118	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
T	Methyltransf_11	e4gf5T2	A: alpha bundles	X: DEATH domain	H: 40S ribosomal protein S13 N-terminal domain	T: 40S ribosomal protein S13 N-terminal domain	F: Methyltransf_11	ECOD (develop294)
S	Methyltransf_11	e4gf5S2	A: alpha bundles	X: DEATH domain	H: 40S ribosomal protein S13 N-terminal domain	T: 40S ribosomal protein S13 N-terminal domain	F: Methyltransf_11	ECOD (develop294)
R	Methyltransf_11	e4gf5R2	A: alpha bundles	X: DEATH domain	H: 40S ribosomal protein S13 N-terminal domain	T: 40S ribosomal protein S13 N-terminal domain	F: Methyltransf_11	ECOD (develop294)
Q	Methyltransf_11	e4gf5Q2	A: alpha bundles	X: DEATH domain	H: 40S ribosomal protein S13 N-terminal domain	T: 40S ribosomal protein S13 N-terminal domain	F: Methyltransf_11	ECOD (develop294)
P	Methyltransf_11	e4gf5P2	A: alpha bundles	X: DEATH domain	H: 40S ribosomal protein S13 N-terminal domain	T: 40S ribosomal protein S13 N-terminal domain	F: Methyltransf_11	ECOD (develop294)
O	Methyltransf_11	e4gf5O2	A: alpha bundles	X: DEATH domain	H: 40S ribosomal protein S13 N-terminal domain	T: 40S ribosomal protein S13 N-terminal domain	F: Methyltransf_11	ECOD (develop294)
N	Methyltransf_11	e4gf5N2	A: alpha bundles	X: DEATH domain	H: 40S ribosomal protein S13 N-terminal domain	T: 40S ribosomal protein S13 N-terminal domain	F: Methyltransf_11	ECOD (develop294)
M	Methyltransf_11	e4gf5M2	A: alpha bundles	X: DEATH domain	H: 40S ribosomal protein S13 N-terminal domain	T: 40S ribosomal protein S13 N-terminal domain	F: Methyltransf_11	ECOD (develop294)
L	Methyltransf_11	e4gf5L2	A: alpha bundles	X: DEATH domain	H: 40S ribosomal protein S13 N-terminal domain	T: 40S ribosomal protein S13 N-terminal domain	F: Methyltransf_11	ECOD (develop294)
K	Methyltransf_11	e4gf5K2	A: alpha bundles	X: DEATH domain	H: 40S ribosomal protein S13 N-terminal domain	T: 40S ribosomal protein S13 N-terminal domain	F: Methyltransf_11	ECOD (develop294)
J	Methyltransf_11	e4gf5J2	A: alpha bundles	X: DEATH domain	H: 40S ribosomal protein S13 N-terminal domain	T: 40S ribosomal protein S13 N-terminal domain	F: Methyltransf_11	ECOD (develop294)
I	Methyltransf_11	e4gf5I2	A: alpha bundles	X: DEATH domain	H: 40S ribosomal protein S13 N-terminal domain	T: 40S ribosomal protein S13 N-terminal domain	F: Methyltransf_11	ECOD (develop294)
H [auth G]	Methyltransf_11	e4gf5G2	A: alpha bundles	X: DEATH domain	H: 40S ribosomal protein S13 N-terminal domain	T: 40S ribosomal protein S13 N-terminal domain	F: Methyltransf_11	ECOD (develop294)
G [auth D]	Methyltransf_11	e4gf5D2	A: alpha bundles	X: DEATH domain	H: 40S ribosomal protein S13 N-terminal domain	T: 40S ribosomal protein S13 N-terminal domain	F: Methyltransf_11	ECOD (develop294)
F [auth B]	Methyltransf_11	e4gf5B2	A: alpha bundles	X: DEATH domain	H: 40S ribosomal protein S13 N-terminal domain	T: 40S ribosomal protein S13 N-terminal domain	F: Methyltransf_11	ECOD (develop294)
E [auth H]	Methyltransf_11	e4gf5H2	A: alpha bundles	X: DEATH domain	H: 40S ribosomal protein S13 N-terminal domain	T: 40S ribosomal protein S13 N-terminal domain	F: Methyltransf_11	ECOD (develop294)
D [auth F]	Methyltransf_11	e4gf5F2	A: alpha bundles	X: DEATH domain	H: 40S ribosomal protein S13 N-terminal domain	T: 40S ribosomal protein S13 N-terminal domain	F: Methyltransf_11	ECOD (develop294)
C [auth E]	Methyltransf_11	e4gf5E2	A: alpha bundles	X: DEATH domain	H: 40S ribosomal protein S13 N-terminal domain	T: 40S ribosomal protein S13 N-terminal domain	F: Methyltransf_11	ECOD (develop294)
B [auth C]	Methyltransf_11	e4gf5C2	A: alpha bundles	X: DEATH domain	H: 40S ribosomal protein S13 N-terminal domain	T: 40S ribosomal protein S13 N-terminal domain	F: Methyltransf_11	ECOD (develop294)
A	OSCP	e4gf5A1	A: alpha bundles	X: Flavodoxin-like	H: SH3	T: SH3	F: OSCP	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
T	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
S	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
R	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
Q	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
P	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
O	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
N	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
M	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
L	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
K	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
J	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
I	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
H [auth G]	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
G [auth D]	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
F [auth B]	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
E [auth H]	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
D [auth F]	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
C [auth E]	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
B [auth C]	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
A	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B [auth C], C [auth E], D [auth F], E [auth H], A, B [auth C], C [auth E], D [auth F], E [auth H], F [auth B], G [auth D], H [auth G], I, J, K, L, M, N, O, P, Q, R, S, T	CalS11	O-methyltransferase activity transferase activity, transferring one-carbon groups transferase activity methyltransferase activity catalytic activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B [auth C], C [auth E], D [auth F], E [auth H], A, B [auth C], C [auth E], D [auth F], E [auth H], F [auth B], G [auth D], H [auth G], I, J, K, L, M, N, O, P, Q, R, S, T	IPR008884	Macrocin-O-methyltransferase	Family
A, B [auth C], C [auth E], D [auth F], E [auth H], A, B [auth C], C [auth E], D [auth F], E [auth H], F [auth B], G [auth D], H [auth G], I, J, K, L, M, N, O, P, Q, R, S, T	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Homologous Superfamily