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Crystal structure of human IL-1beta in complex with therapeutic antibody binding fragment of gevokizumab


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyCytokine 8043267 3000648 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APrenyltransfe4g6mA1 A: alpha arraysX: GIY-YIG endonucleaseH: GIY-YIG endonucleaseT: GIY-YIG endonucleaseF: PrenyltransfECOD (v295.2)
B [auth H]FtsJe4g6mH1 A: alpha arraysX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: FtsJECOD (v295.2)
C [auth L]Prenyltransfe4g6mL1 A: alpha arraysX: GIY-YIG endonucleaseH: GIY-YIG endonucleaseT: GIY-YIG endonucleaseF: PrenyltransfECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.80.10.50 Mainly Beta Trefoil Trefoil (Acidic Fibroblast Growth Factor, subunit A) CATH (4.3.0)
B [auth H]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
C [auth L]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
B [auth H]INN name VH-CH1 Chimeric (chimeric) IGHV8-12*01, IGHV8-8*01, IGHJ5*01, IGHG1*03 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-1_KAPPA IMGT (202637-0)
C [auth L]INN name L-KAPPA Chimeric (chimeric) IGKV10-96*01, IGKV10-96*02, IGKJ1*01, IGKC*01 V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA IG FAB-GAMMA-1_KAPPA IMGT (202637-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
B [auth H]Heavy ChainIGHV4 -interleukin-1 betaSAbDab (2026-09-25)
C [auth L]Light ChainIGKV1 Kappainterleukin-1 betaSAbDab (2026-09-25)

Thera-SAbDab Antibody Annotation Thera-SAbDab Database Homepage

ChainNameTargetProvenance Source
B [auth H] Gevokizumab IL1BTherapeutic SAbDab (2026-09-25)
C [auth L] Gevokizumab IL1BTherapeutic SAbDab (2026-09-25)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00340Interleukin-1 / 18 (IL1)Interleukin-1 / 18This family includes interleukin-1 and interleukin-18. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Interleukin-1 beta
B [auth H]heavy chain of gevokizumab antibody binding fragment---
C [auth L]light chain of gevokizumab antibody binding fragment---

InterPro: Protein Family Classification InterPro Database Homepage

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
:  P01584