4FM4 | pdb_00004fm4

Wild Type Fe-type Nitrile Hydratase from Comamonas testosteroni Ni1

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
P	d4fm4p_	All beta proteins	SH3-like barrel	Electron transport accessory proteins	automated matches	automated matches	(Comamonas testosteroni ) [TaxId: 285 ],	SCOPe (2.08)
N	d4fm4n_	All beta proteins	SH3-like barrel	Electron transport accessory proteins	automated matches	automated matches	(Comamonas testosteroni ) [TaxId: 285 ],	SCOPe (2.08)
L	d4fm4l_	All beta proteins	SH3-like barrel	Electron transport accessory proteins	automated matches	automated matches	(Comamonas testosteroni ) [TaxId: 285 ],	SCOPe (2.08)
J	d4fm4j_	All beta proteins	SH3-like barrel	Electron transport accessory proteins	automated matches	automated matches	(Comamonas testosteroni ) [TaxId: 285 ],	SCOPe (2.08)
H	d4fm4h_	All beta proteins	SH3-like barrel	Electron transport accessory proteins	automated matches	automated matches	(Comamonas testosteroni ) [TaxId: 285 ],	SCOPe (2.08)
F	d4fm4f_	All beta proteins	SH3-like barrel	Electron transport accessory proteins	automated matches	automated matches	(Comamonas testosteroni ) [TaxId: 285 ],	SCOPe (2.08)
D	d4fm4d_	All beta proteins	SH3-like barrel	Electron transport accessory proteins	automated matches	automated matches	(Comamonas testosteroni ) [TaxId: 285 ],	SCOPe (2.08)
B	d4fm4b_	All beta proteins	SH3-like barrel	Electron transport accessory proteins	automated matches	automated matches	(Comamonas testosteroni ) [TaxId: 285 ],	SCOPe (2.08)
O	d4fm4o_	Alpha and beta proteins (a+b)	Nitrile hydratase alpha chain	Nitrile hydratase alpha chain	automated matches	automated matches	(Comamonas testosteroni ) [TaxId: 285 ],	SCOPe (2.08)
M	d4fm4m_	Alpha and beta proteins (a+b)	Nitrile hydratase alpha chain	Nitrile hydratase alpha chain	automated matches	automated matches	(Comamonas testosteroni ) [TaxId: 285 ],	SCOPe (2.08)
K	d4fm4k_	Alpha and beta proteins (a+b)	Nitrile hydratase alpha chain	Nitrile hydratase alpha chain	automated matches	automated matches	(Comamonas testosteroni ) [TaxId: 285 ],	SCOPe (2.08)
I	d4fm4i_	Alpha and beta proteins (a+b)	Nitrile hydratase alpha chain	Nitrile hydratase alpha chain	automated matches	automated matches	(Comamonas testosteroni ) [TaxId: 285 ],	SCOPe (2.08)
G	d4fm4g_	Alpha and beta proteins (a+b)	Nitrile hydratase alpha chain	Nitrile hydratase alpha chain	automated matches	automated matches	(Comamonas testosteroni ) [TaxId: 285 ],	SCOPe (2.08)
E	d4fm4e_	Alpha and beta proteins (a+b)	Nitrile hydratase alpha chain	Nitrile hydratase alpha chain	automated matches	automated matches	(Comamonas testosteroni ) [TaxId: 285 ],	SCOPe (2.08)
C	d4fm4c_	Alpha and beta proteins (a+b)	Nitrile hydratase alpha chain	Nitrile hydratase alpha chain	automated matches	automated matches	(Comamonas testosteroni ) [TaxId: 285 ],	SCOPe (2.08)
A	d4fm4a_	Alpha and beta proteins (a+b)	Nitrile hydratase alpha chain	Nitrile hydratase alpha chain	automated matches	automated matches	(Comamonas testosteroni ) [TaxId: 285 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
P	SCOP2B Superfamily	Electron transport accessory proteins	8077355	3000325	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Electron transport accessory proteins	8077355	3000325	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Electron transport accessory proteins	8077355	3000325	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Electron transport accessory proteins	8077355	3000325	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Electron transport accessory proteins	8077355	3000325	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Electron transport accessory proteins	8077355	3000325	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Electron transport accessory proteins	8077355	3000325	SCOP2B (2022-06-29)
B	SCOP2 Family	Nitrile hydratase beta chain	8077354	4001743	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	Electron transport accessory proteins	8077355	3000325	SCOP2 (2022-06-29)
O	SCOP2B Superfamily	Nitrile hydratase alpha chain	8077351	3000945	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Nitrile hydratase alpha chain	8077351	3000945	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Nitrile hydratase alpha chain	8077351	3000945	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Nitrile hydratase alpha chain	8077351	3000945	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Nitrile hydratase alpha chain	8077351	3000945	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Nitrile hydratase alpha chain	8077351	3000945	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Nitrile hydratase alpha chain	8077351	3000945	SCOP2B (2022-06-29)
A	SCOP2 Family	Nitrile hydratase alpha chain	8077350	4002201	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Nitrile hydratase alpha chain	8077351	3000945	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
P	e4fm4P2	A: DEATH domain	X: Ten stranded beta/alpha barrel	H: Ten stranded beta/alpha barrel	T: N-glycanase_C	F:	ECOD (20:10:01)
N	e4fm4N2	A: DEATH domain	X: Ten stranded beta/alpha barrel	H: Ten stranded beta/alpha barrel	T: N-glycanase_C	F:	ECOD (20:10:01)
L	e4fm4L2	A: DEATH domain	X: Ten stranded beta/alpha barrel	H: Ten stranded beta/alpha barrel	T: N-glycanase_C	F:	ECOD (20:10:01)
J	e4fm4J2	A: DEATH domain	X: Ten stranded beta/alpha barrel	H: Ten stranded beta/alpha barrel	T: N-glycanase_C	F:	ECOD (20:10:01)
H	e4fm4H2	A: DEATH domain	X: Ten stranded beta/alpha barrel	H: Ten stranded beta/alpha barrel	T: N-glycanase_C	F:	ECOD (20:10:01)
F	e4fm4F2	A: DEATH domain	X: Ten stranded beta/alpha barrel	H: Ten stranded beta/alpha barrel	T: N-glycanase_C	F:	ECOD (20:10:01)
D	e4fm4D2	A: DEATH domain	X: Ten stranded beta/alpha barrel	H: Ten stranded beta/alpha barrel	T: N-glycanase_C	F:	ECOD (20:10:01)
B	e4fm4B2	A: DEATH domain	X: Ten stranded beta/alpha barrel	H: Ten stranded beta/alpha barrel	T: N-glycanase_C	F:	ECOD (20:10:01)
O	e4fm4O1	A: beta-Grasp	X: Ubiquitin-related	H: Ubiquitin-like	T: V-set	F:	ECOD (20:10:01)
M	e4fm4M1	A: beta-Grasp	X: Ubiquitin-related	H: Ubiquitin-like	T: V-set	F:	ECOD (20:10:01)
K	e4fm4K1	A: beta-Grasp	X: Ubiquitin-related	H: Ubiquitin-like	T: V-set	F:	ECOD (20:10:01)
I	e4fm4I1	A: beta-Grasp	X: Ubiquitin-related	H: Ubiquitin-like	T: V-set	F:	ECOD (20:10:01)
G	e4fm4G1	A: beta-Grasp	X: Ubiquitin-related	H: Ubiquitin-like	T: V-set	F:	ECOD (20:10:01)
E	e4fm4E1	A: beta-Grasp	X: Ubiquitin-related	H: Ubiquitin-like	T: V-set	F:	ECOD (20:10:01)
C	e4fm4C1	A: beta-Grasp	X: Ubiquitin-related	H: Ubiquitin-like	T: V-set	F:	ECOD (20:10:01)
A	e4fm4A1	A: Flavodoxin-like	X: SH3	H: SH3	T: DMRL_synthase	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
P	1.10.472.20	Mainly Alpha	Orthogonal Bundle	Cyclin A	domain 1	CATH (4.3.0)
P	2.30.30.50	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
N	1.10.472.20	Mainly Alpha	Orthogonal Bundle	Cyclin A	domain 1	CATH (4.3.0)
N	2.30.30.50	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
L	1.10.472.20	Mainly Alpha	Orthogonal Bundle	Cyclin A	domain 1	CATH (4.3.0)
L	2.30.30.50	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
J	1.10.472.20	Mainly Alpha	Orthogonal Bundle	Cyclin A	domain 1	CATH (4.3.0)
J	2.30.30.50	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
H	1.10.472.20	Mainly Alpha	Orthogonal Bundle	Cyclin A	domain 1	CATH (4.3.0)
H	2.30.30.50	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
F	1.10.472.20	Mainly Alpha	Orthogonal Bundle	Cyclin A	domain 1	CATH (4.3.0)
F	2.30.30.50	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
D	1.10.472.20	Mainly Alpha	Orthogonal Bundle	Cyclin A	domain 1	CATH (4.3.0)
D	2.30.30.50	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
B	1.10.472.20	Mainly Alpha	Orthogonal Bundle	Cyclin A	domain 1	CATH (4.3.0)
B	2.30.30.50	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
O	3.90.330.10	Alpha Beta	Alpha-Beta Complex	Nitrile Hydratase	Chain A	CATH (4.3.0)
M	3.90.330.10	Alpha Beta	Alpha-Beta Complex	Nitrile Hydratase	Chain A	CATH (4.3.0)
K	3.90.330.10	Alpha Beta	Alpha-Beta Complex	Nitrile Hydratase	Chain A	CATH (4.3.0)
I	3.90.330.10	Alpha Beta	Alpha-Beta Complex	Nitrile Hydratase	Chain A	CATH (4.3.0)
G	3.90.330.10	Alpha Beta	Alpha-Beta Complex	Nitrile Hydratase	Chain A	CATH (4.3.0)
E	3.90.330.10	Alpha Beta	Alpha-Beta Complex	Nitrile Hydratase	Chain A	CATH (4.3.0)
C	3.90.330.10	Alpha Beta	Alpha-Beta Complex	Nitrile Hydratase	Chain A	CATH (4.3.0)
A	3.90.330.10	Alpha Beta	Alpha-Beta Complex	Nitrile Hydratase	Chain A	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B, D, F, H, J B, D, F, H, J, L, N, P	Nitrile hydratase beta subunit	hydro-lyase activity lyase activity catalytic activity carbon-oxygen lyase activity nitrile hydratase activity cation binding transition metal ion binding ion binding binding metal ion binding small molecule binding	-	-
A, C, E, G, I A, C, E, G, I, K, M, O	Nitrile hydratase alpha subunit	hydro-lyase activity lyase activity catalytic activity carbon-oxygen lyase activity nitrile hydratase activity cation binding transition metal ion binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B, D, F, H, J B, D, F, H, J, L, N, P	IPR003168	Nitrile hydratase, beta subunit	Family
B, D, F, H, J B, D, F, H, J, L, N, P	IPR049054	Nitrile hydratase beta subunit-like, N-terminal domain	Domain
B, D, F, H, J B, D, F, H, J, L, N, P	IPR008990	Electron transport accessory-like domain superfamily	Homologous Superfamily
B, D, F, H, J B, D, F, H, J, L, N, P	IPR042262	Nitrile hydratase beta subunit, N-terminal	Homologous Superfamily
B, D, F, H, J B, D, F, H, J, L, N, P	IPR024690	Nitrile hydratase beta subunit domain	Domain
A, C, E, G, I A, C, E, G, I, K, M, O	IPR004232	Nitrile hydratase alpha/Thiocyanate hydrolase gamma	Domain
A, C, E, G, I A, C, E, G, I, K, M, O	IPR036648	Nitrile hydratase alpha /Thiocyanate hydrolase gamma superfamily	Homologous Superfamily
A, C, E, G, I A, C, E, G, I, K, M, O	IPR023900	Nitrile hydratase alpha subunit /Thiocyanate hydrolase gamma subunit	Family

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A, C, E, G, I A, C, E, G, I, K, M, O	CSD	Parent Component: CYS RESID: AA0262 PSI-MOD : L-cysteine sulfinic acid MOD:00267