Pyrococcus abyssi B family DNA polymerase (triple mutant) bound to a dsDNA, in edition mode
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C [auth A] | e4fm2A1 | A: amino-terminal domain of OmpATb | X: amino-terminal domain of OmpATb | H: amino-terminal domain of OmpATb | T: | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C [auth A] | 3.30.342.10 | Alpha Beta | 2-Layer Sandwich | DNA Polymerase | Chain A, domain 1 | CATH (4.3.0) |
| C [auth A] | 3.30.420.10 | Alpha Beta | 2-Layer Sandwich | Nucleotidyltransferase | domain 5 | CATH (4.3.0) |
| C [auth A] | 3.90.1600.10 | Alpha Beta | Alpha-Beta Complex | Palm domain of DNA polymerase | B family DNA polymerase, palm domain | CATH (4.3.0) |
| C [auth A] | 1.10.287.690 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | B family DNA polymerase, finger domain | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| C [auth A] | IPR036397 | Ribonuclease H superfamily | Homologous Superfamily |
| C [auth A] | IPR006134 | DNA-directed DNA polymerase, family B, multifunctional domain | Domain |
| C [auth A] | IPR006172 | DNA-directed DNA polymerase, family B | Family |
| C [auth A] | IPR043502 | DNA/RNA polymerase superfamily | Homologous Superfamily |
| C [auth A] | IPR006133 | DNA-directed DNA polymerase, family B, exonuclease domain | Domain |
| C [auth A] | IPR050240 | DNA polymerase type-B | Family |
| C [auth A] | IPR042087 | DNA polymerase family B, thumb domain | Homologous Superfamily |
| C [auth A] | IPR017964 | DNA-directed DNA polymerase, family B, conserved site | Conserved Site |
| C [auth A] | IPR012337 | Ribonuclease H-like superfamily | Homologous Superfamily |
| C [auth A] | IPR023211 | DNA polymerase, palm domain superfamily | Homologous Superfamily |














