4FIB | pdb_00004fib

Crystal structure of the ydhK protein from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR518A.

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Ce4fibC1 A: Long alpha-hairpinX: C-terminal UvrC-binding domain of UvrBH: C-terminal UvrC-binding domain of UvrBT: LonginF:ECOD (20:10:01)
Ce4fibC2 A: cradle loop barrelX: RIFT-relatedH: double psiT: Glyco_hydro_18,ChitinaseA_NF:ECOD (20:10:01)
Be4fibB1 A: Long alpha-hairpinX: C-terminal UvrC-binding domain of UvrBH: C-terminal UvrC-binding domain of UvrBT: LonginF:ECOD (20:10:01)
Be4fibB2 A: cradle loop barrelX: RIFT-relatedH: double psiT: Glyco_hydro_18,ChitinaseA_NF:ECOD (20:10:01)
Ae4fibA1 A: Long alpha-hairpinX: C-terminal UvrC-binding domain of UvrBH: C-terminal UvrC-binding domain of UvrBT: LonginF:ECOD (20:10:01)
Ae4fibA2 A: cradle loop barrelX: RIFT-relatedH: double psiT: Glyco_hydro_18,ChitinaseA_NF:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C2.30.30.1130 Mainly Beta Roll SH3 type barrels. CATH (4.3.0)
C2.40.10.520 Mainly Beta Beta Barrel Thrombin, subunit H CATH (4.3.0)
B2.30.30.1130 Mainly Beta Roll SH3 type barrels. CATH (4.3.0)
B2.40.10.520 Mainly Beta Beta Barrel Thrombin, subunit H CATH (4.3.0)
A2.30.30.1130 Mainly Beta Roll SH3 type barrels. CATH (4.3.0)
A2.40.10.520 Mainly Beta Beta Barrel Thrombin, subunit H CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF07563Protein of unknown function (DUF1541) (DUF1541)Protein of unknown function (DUF1541)- Family

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR011438Domain of unknown function DUF1541Domain