4FC9

Structure of the C-terminal domain of the type III effector Xcv3220 (XopL)

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth B]EUF07978e4fc9B1 A: alpha arraysX: C-terminal domain of the type III effector Xcv3220 (XopL) (From Topology)H: C-terminal domain of the type III effector Xcv3220 (XopL) (From Topology)T: C-terminal domain of the type III effector Xcv3220 (XopL)F: EUF07978ECOD (1.6)
B [auth A]EUF07978e4fc9A1 A: alpha arraysX: C-terminal domain of the type III effector Xcv3220 (XopL) (From Topology)H: C-terminal domain of the type III effector Xcv3220 (XopL) (From Topology)T: C-terminal domain of the type III effector Xcv3220 (XopL)F: EUF07978ECOD (1.6)
CEUF07978e4fc9C1 A: alpha arraysX: C-terminal domain of the type III effector Xcv3220 (XopL) (From Topology)H: C-terminal domain of the type III effector Xcv3220 (XopL) (From Topology)T: C-terminal domain of the type III effector Xcv3220 (XopL)F: EUF07978ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth B],
B [auth A],
C		PF20817Type III effector Xcv3220, C-terminal domain (XopL_C)Type III effector Xcv3220, C-terminal domainThis domain is found at the C-terminal end of the type III effector Xcv3220 (XopL) from the plant pathogen Xanthomonas campestris and similar proteins from Xanthomonadales. XopL induces plant cell death, subverts plant immunity and shows E3 ubiquitin ...This domain is found at the C-terminal end of the type III effector Xcv3220 (XopL) from the plant pathogen Xanthomonas campestris and similar proteins from Xanthomonadales. XopL induces plant cell death, subverts plant immunity and shows E3 ubiquitin ligase activity, which is associated with this domain. This domain interacts with plant E2 ubiquitin conjugating enzymes and folds into a four-helix bundle, which can be subdivided into two uneven lobes almost perpendicular to each other giving the molecule an 'L' shape. A large cleft with a net negative charge is formed at the intersection of the two lobes [1].
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth B],
B [auth A],
C		IPR032675Leucine-rich repeat domain superfamilyHomologous Superfamily
A [auth B],
B [auth A],
C		IPR048490Type III effector Xcv3220-like, C-terminal domainDomain
A [auth B],
B [auth A],
C		IPR003591Leucine-rich repeat, typical subtypeRepeat