4EBA | pdb_00004eba

Crystal structure of the Rna14-Rna15 complex

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
I [auth H]	CSTF2_hinge	e4ebaH2	A: alpha bundles	X: mRNA 3'-end-processing protein Rna15p hinge domain (From Topology)	H: mRNA 3'-end-processing protein Rna15p hinge domain (From Topology)	T: mRNA 3'-end-processing protein Rna15p hinge domain	F: CSTF2_hinge	ECOD (1.6)
H [auth I]	CSTF2_hinge	e4ebaI2	A: alpha bundles	X: mRNA 3'-end-processing protein Rna15p hinge domain (From Topology)	H: mRNA 3'-end-processing protein Rna15p hinge domain (From Topology)	T: mRNA 3'-end-processing protein Rna15p hinge domain	F: CSTF2_hinge	ECOD (1.6)
G	CSTF2_hinge	e4ebaG1	A: alpha bundles	X: mRNA 3'-end-processing protein Rna15p hinge domain (From Topology)	H: mRNA 3'-end-processing protein Rna15p hinge domain (From Topology)	T: mRNA 3'-end-processing protein Rna15p hinge domain	F: CSTF2_hinge	ECOD (1.6)
F	Suf	e4ebaF7	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: Suf	ECOD (1.6)
E	Suf	e4ebaE1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: Suf	ECOD (1.6)
D	Suf	e4ebaD7	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: Suf	ECOD (1.6)
C	Suf	e4ebaC1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: Suf	ECOD (1.6)
B	Suf	e4ebaB1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: Suf	ECOD (1.6)
A	Suf	e4ebaA1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: Suf	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
I [auth H]	1.25.40.630	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat		CATH (4.3.0)
H [auth I]	1.25.40.630	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat		CATH (4.3.0)
G	1.25.40.630	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat		CATH (4.3.0)
F	1.25.40.1040	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat		CATH (4.3.0)
E	1.25.40.1040	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat		CATH (4.3.0)
D	1.25.40.1040	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat		CATH (4.3.0)
C	1.25.40.1040	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat		CATH (4.3.0)
B	1.25.40.1040	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat		CATH (4.3.0)
A	1.25.40.1040	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
G, H [auth I], I [auth H]	PF14327	Hinge domain of cleavage stimulation factor subunit 2 (CSTF2_hinge)	Hinge domain of cleavage stimulation factor subunit 2	-	Family
A, B, C, D, E A, B, C, D, E, F	PF05843	Suppressor of forked protein (Suf) (Suf)	Suppressor of forked protein (Suf)	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
G, H [auth I], I [auth H]	Rna15	RNA binding binding nucleic acid binding mRNA binding	mRNA 3'-end processing RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process mRNA processing mRNA metabolic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process biosynthetic process RNA 3'-end processing mRNA 3'-end processing RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process mRNA processing mRNA metabolic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process biosynthetic process RNA 3'-end processing metabolic process cellular process RNA processing macromolecule metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle intracellular organelle cellular anatomical structure organelle mRNA cleavage and polyadenylation specificity factor complex mRNA cleavage factor complex
A, B, C, D, E A, B, C, D, E, F	mRNA 3'-end-processing protein RNA14	RNA binding binding nucleic acid binding mRNA binding	mRNA 3'-end processing RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process mRNA processing mRNA metabolic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process biosynthetic process RNA 3'-end processing mRNA 3'-end processing RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process mRNA processing mRNA metabolic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process biosynthetic process RNA 3'-end processing metabolic process cellular process RNA processing macromolecule metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm protein-containing complex membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
G, H [auth I], I [auth H]	IPR025742	Cleavage stimulation factor subunit 2, hinge domain	Domain
G, H [auth I], I [auth H]	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
G, H [auth I], I [auth H]	IPR038192	Transcription termination and cleavage factor, C-terminal domain superfamily	Homologous Superfamily
G, H [auth I], I [auth H]	IPR000504	RNA recognition motif domain	Domain
G, H [auth I], I [auth H]	IPR035979	RNA-binding domain superfamily	Homologous Superfamily
G, H [auth I], I [auth H]	IPR026896	Transcription termination and cleavage factor, C-terminal domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR003107	HAT (Half-A-TPR) repeat	Repeat
A, B, C, D, E A, B, C, D, E, F	IPR008847	Suppressor of forked	Domain
A, B, C, D, E A, B, C, D, E, F	IPR045243	mRNA 3'-end-processing protein Rna14-like	Family
A, B, C, D, E A, B, C, D, E, F	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.