4DZG | pdb_00004dzg

Crystal structure of Aeromonas hydrophila PliG, a periplasmic lysozyme inhibitor of g-type lysozyme


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APPCe4dzgA1 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Galactose-binding domain-likeF: PPCECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.120.380 Mainly Beta Sandwich Jelly Rolls CATH (4.2.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF04151Bacterial pre-peptidase C-terminal domain (PPC)Bacterial pre-peptidase C-terminal domainThis domain is normally found at the C-terminus of secreted bacterial peptidases. They are not present in the active peptidase. It is possible that they fulfill a similar role to the PKD (Pfam:PF00801) domain, which also are found in this context. ...This domain is normally found at the C-terminus of secreted bacterial peptidases. They are not present in the active peptidase. It is possible that they fulfill a similar role to the PKD (Pfam:PF00801) domain, which also are found in this context. Visual analysis suggests that PKD and PPC are distantly related (personal obs:Bateman A, Yeats C).
Domain

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
MAA Parent Component: ALA

RESIDAA0061

PSI-MOD :  N-methyl-L-alanine MOD:00070
MLY Parent Component: LYS

RESIDAA0061 , AA0075

PSI-MOD :  N-methyl-L-alanine MOD:00070 , N6,N6-dimethyl-L-lysine MOD:00084