4DYR | pdb_00004dyr

Crystal structure of terminase small subunit gp1 of the bacterial virus sf6 with CAPS PH10.5 buffer


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyHomeodomain-like 8092494 3000001 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyHomeodomain-like 8092494 3000001 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Be4dyrB2 A: Subtilisin-likeX: Subtilisin-likeH: Subtilisin-likeT: ResolvaseF:ECOD (20:10:01)
Ae4dyrA2 A: Subtilisin-likeX: Subtilisin-likeH: Subtilisin-likeT: ResolvaseF:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B1.10.10.60 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Homeodomain-likeCATH (4.3.0)
A1.10.10.60 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Homeodomain-likeCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF20901Bacteriophage Sf6, terminase small subunit-like (Sf6_terminase)Bacteriophage Sf6, terminase small subunit-like- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Gene 1 protein - -

InterPro: Protein Family Classification InterPro Database Homepage