4DSD | pdb_00004dsd

Crystal structure of a putative periplasmic protein (BACOVA_05534) from Bacteroides ovatus ATCC 8483 at 1.75 A resolution

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd4dsdb_ Alpha and beta proteins (a+b) BLIP-like BT0923-like automated matches automated matches (Bacteroides ovatus ATCC 8483 ) [TaxId: 411476 ], SCOPe (2.08)
Ad4dsda_ Alpha and beta proteins (a+b) BLIP-like BT0923-like automated matches automated matches (Bacteroides ovatus ATCC 8483 ) [TaxId: 411476 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyBT0923-like 8060005 4002225 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyBLIP repeat-like 8060006 3000321 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyBLIP repeat-like 8092092 3000321 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BVinculine4dsdB3 A: a/b three-layered sandwichesX: DEATH domainH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: VinculinECOD (v294.1)
AVinculine4dsdA3 A: a/b three-layered sandwichesX: DEATH domainH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: VinculinECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.40.1420.30 Alpha Beta 3-Layer(aba) Sandwich Inhibitor of vertebrate lysozyme, Ivy CATH (4.3.0)
A3.40.1420.30 Alpha Beta 3-Layer(aba) Sandwich Inhibitor of vertebrate lysozyme, Ivy CATH (4.3.0)