Structural, biophysical and biochemical analyses of a Clostridium perfringens Sortase D5 transpeptidase
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | e4d70B1 | A: a/b three-layered sandwiches | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: | ECOD (v294.1) | |
| A | e4d70A1 | A: a/b three-layered sandwiches | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 2.40.260.10 | Mainly Beta | Beta Barrel | Sortase | Chain: A | CATH (4.3.0) |
| A | 2.40.260.10 | Mainly Beta | Beta Barrel | Sortase | Chain: A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF04203 | Sortase domain (Sortase) | Sortase domain | The founder member of this family is S. aureus sortase, a transpeptidase that attaches surface proteins by the threonine of an LPXTG motif to the cell wall [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| SORTASE FAMILY PROTEIN | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR023365 | Sortase domain superfamily | Homologous Superfamily | |
| IPR042000 | Sortase D, type 2 | Family | |
| IPR005754 | Sortase family | Family |














