4D1K | pdb_00004d1k

Cryo-electron microscopy of tubular arrays of HIV-1 Gag resolves structures essential for immature virus assembly.


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ACIDe4d1kA1 A: a/b three-layered sandwichesX: HTHH: Toll/Interleukin receptor TIR domainT: Toll/Interleukin receptor TIR domainF: CIDECOD (v294.1)
BCIDe4d1kB1 A: a/b three-layered sandwichesX: HTHH: Toll/Interleukin receptor TIR domainT: Toll/Interleukin receptor TIR domainF: CIDECOD (v294.1)
CCIDe4d1kC1 A: a/b three-layered sandwichesX: HTHH: Toll/Interleukin receptor TIR domainT: Toll/Interleukin receptor TIR domainF: CIDECOD (v294.1)
DCIDe4d1kD1 A: a/b three-layered sandwichesX: HTHH: Toll/Interleukin receptor TIR domainT: Toll/Interleukin receptor TIR domainF: CIDECOD (v294.1)
ECIDe4d1kE1 A: a/b three-layered sandwichesX: HTHH: Toll/Interleukin receptor TIR domainT: Toll/Interleukin receptor TIR domainF: CIDECOD (v294.1)
FCIDe4d1kF1 A: a/b three-layered sandwichesX: HTHH: Toll/Interleukin receptor TIR domainT: Toll/Interleukin receptor TIR domainF: CIDECOD (v294.1)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR045345Retroviral nucleocapsid Gag protein p24, C-terminal domainDomain
A, B, C, D, E
IPR008919Retrovirus capsid, N-terminalHomologous Superfamily
A, B, C, D, E
IPR050195Primate lentivirus group Gag polyprotein-likeDomain
A, B, C, D, E
IPR008916Retrovirus capsid, C-terminalHomologous Superfamily