4D0K
Complex of Chaetomium thermophilum PAN2 (WD40-CS1) with PAN3 (C-term)
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | ANAPC4_WD40_2 | e4d0kA1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: ANAPC4_WD40_2 | ECOD (1.6) |
B | UNK_F_TYPE | e4d0kB1 | A: alpha arrays | X: Dimerization domain in caprin-1 and PAN3 (From Topology) | H: Dimerization domain in caprin-1 and PAN3 (From Topology) | T: Dimerization domain in caprin-1 and PAN3 | F: UNK_F_TYPE | ECOD (1.6) |
C | UNK_F_TYPE | e4d0kC1 | A: alpha arrays | X: Dimerization domain in caprin-1 and PAN3 (From Topology) | H: Dimerization domain in caprin-1 and PAN3 (From Topology) | T: Dimerization domain in caprin-1 and PAN3 | F: UNK_F_TYPE | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.130.10.10 | Mainly Beta | 7 Propeller | Methylamine Dehydrogenase | Chain H | CATH (4.3.0) |
B | 1.10.287.3700 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | CATH (4.3.0) | |
C | 1.10.287.3700 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF18101 | Pan3 Pseudokinase domain (Pan3_PK) | Pan3 Pseudokinase domain | This is a pseudokinase (PK) domain found in PAB-dependent poly(A)-specific ribonuclease subunit pan3. PAN3 proteins contain three prominent regions: an unstructured N-terminal region (N-term), a central PK domain, and a highly conserved C-terminal d ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036397 | Ribonuclease H superfamily | Homologous Superfamily | |
IPR028889 | Ubiquitin specific protease domain | Domain | |
IPR030843 | PAN2-PAN3 deadenylation complex catalytic subunit PAN2 | Family | |
IPR028881 | PAN2, UCH domain | Domain | |
IPR036322 | WD40-repeat-containing domain superfamily | Homologous Superfamily | |
IPR048841 | PAN2-PAN3 deadenylation complex catalytic subunit PAN2, N-terminal | Domain | |
IPR038765 | Papain-like cysteine peptidase superfamily | Homologous Superfamily | |
IPR050785 | PAN2-PAN3 complex catalytic subunit | Family | |
IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily | |
IPR012337 | Ribonuclease H-like superfamily | Homologous Superfamily | |
IPR013520 | Exonuclease, RNase T/DNA polymerase III | Domain | |
IPR030844 | PAN2-PAN3 deadenylation complex subunit PAN3 | Family | |
IPR000571 | Zinc finger, CCCH-type | Domain | |
IPR011009 | Protein kinase-like domain superfamily | Homologous Superfamily | |
IPR000719 | Protein kinase domain | Domain | |
IPR041332 | Pan3 pseudokinase domain | Domain |