4CV5
yeast NOT1 CN9BD-CAF40 complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Not1 3-helical bundle-like | 8047999 | 4005904 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Not1 3-helical bundle-like | 8090037 | 3002412 | SCOP2 (2022-06-29) |
C | SCOP2B Superfamily | Not1 3-helical bundle-like | 8090037 | 3002412 | SCOP2B (2022-06-29) |
B | SCOP2 Family | Rcd1-like | 8045301 | 4004397 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | ARM repeat-like | 8090036 | 3000116 | SCOP2 (2022-06-29) |
D | SCOP2B Superfamily | ARM repeat-like | 8090036 | 3000116 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF12842 | e4cv5A1 | A: alpha bundles | X: CNOT9 binding domain CN9BD (DUF3819) (From Topology) | H: CNOT9 binding domain CN9BD (DUF3819) (From Topology) | T: CNOT9 binding domain CN9BD (DUF3819) | F: PF12842 | ECOD (1.6) |
C | PF12842 | e4cv5C1 | A: alpha bundles | X: CNOT9 binding domain CN9BD (DUF3819) (From Topology) | H: CNOT9 binding domain CN9BD (DUF3819) (From Topology) | T: CNOT9 binding domain CN9BD (DUF3819) | F: PF12842 | ECOD (1.6) |
B | PF04078 | e4cv5B1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF04078 | ECOD (1.6) |
D | PF04078 | e4cv5D1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF04078 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 1.25.10.10 | Mainly Alpha | Alpha Horseshoe | Leucine-rich Repeat Variant | Leucine-rich Repeat Variant | CATH (4.3.0) |
D | 1.25.10.10 | Mainly Alpha | Alpha Horseshoe | Leucine-rich Repeat Variant | Leucine-rich Repeat Variant | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF12842 | CCR4-Not complex, Not1 subunit, domain of unknown function DUF3819 (DUF3819) | CCR4-Not complex, Not1 subunit, domain of unknown function DUF3819 | This is an uncharacterised domain that is found on the CCR4-Not complex component Not1. Not1 is a global regulator of transcription that affects genes positively and negatively and is thought to regulate transcription factor TFIID [1]. | Domain | |
PF04078 | Cell differentiation family, Rcd1-like (Rcd1) | Cell differentiation family, Rcd1-like | - | Repeat |