4COG | pdb_00004cog

Crystal structure of kynurenine formamidase from Burkholderia cenocepacia

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d4cogd_	Alpha and beta proteins (a/b)	The 'swivelling' beta/beta/alpha domain	Putative cyclase	automated matches	automated matches	(Burkholderia cenocepacia J2315 ) [TaxId: 216591 ],	SCOPe (2.08)
C	d4cogc_	Alpha and beta proteins (a/b)	The 'swivelling' beta/beta/alpha domain	Putative cyclase	automated matches	automated matches	(Burkholderia cenocepacia J2315 ) [TaxId: 216591 ],	SCOPe (2.08)
B	d4cogb_	Alpha and beta proteins (a/b)	The 'swivelling' beta/beta/alpha domain	Putative cyclase	automated matches	automated matches	(Burkholderia cenocepacia J2315 ) [TaxId: 216591 ],	SCOPe (2.08)
A	d4coga_	Alpha and beta proteins (a/b)	The 'swivelling' beta/beta/alpha domain	Putative cyclase	automated matches	automated matches	(Burkholderia cenocepacia J2315 ) [TaxId: 216591 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	PCI	e4cogD1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: PCI	ECOD (v294.1)
C	PCI	e4cogC1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: PCI	ECOD (v294.1)
B	PCI	e4cogB1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: PCI	ECOD (v294.1)
A	PCI	e4cogA1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F: PCI	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.50.30.50	Alpha Beta	3-Layer(bba) Sandwich	Glucose Oxidase	domain 1	CATH (4.3.0)
C	3.50.30.50	Alpha Beta	3-Layer(bba) Sandwich	Glucose Oxidase	domain 1	CATH (4.3.0)
B	3.50.30.50	Alpha Beta	3-Layer(bba) Sandwich	Glucose Oxidase	domain 1	CATH (4.3.0)
A	3.50.30.50	Alpha Beta	3-Layer(bba) Sandwich	Glucose Oxidase	domain 1	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	KYNURENINE FORMAMIDASE	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding amidase activity formamidase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides hydrolase activity catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds arylformamidase activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR017484	Kynurenine formamidase, bacteria	Family
A, B, C, D	IPR007325	Kynurenine formamidase/cyclase-like	Family
A, B, C, D	IPR037175	Kynurenine formamidase superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.