4C9D | pdb_00004c9d

Cas6 (TTHB231) product complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyCRISPR-associated proteins 8052201 3001554 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyCRISPR-associated proteins 8052200 3001554 SCOP2B (2022-06-29)
ASCOP2 FamilyCRISPR_Cas6-like 8051426 4007361 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyCRISPR-associated proteins 8052201 3001554 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyCRISPR-associated proteins 8052200 3001554 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BALOe4c9dB2 A: a/b three-layered sandwichesX: DEATH domainH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: ALOECOD (v294.1)
ATSP_1e4c9dA1 A: a/b three-layered sandwichesX: DP domainH: DP domainT: DP domainF: TSP_1ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.30.70.1890 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
B3.30.70.1900 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
A3.30.70.1890 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
A3.30.70.1900 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF10040CRISPR-associated endoribonuclease Cas6 (CRISPR_Cas6)CRISPR-associated endoribonuclease Cas6- Family
A, B
PF19308CRISPR Cas6 N-terminal domain (CRISPR_Cas6_N)CRISPR Cas6 N-terminal domainIn Type I and III CRISPR/Cas systems, the Cas6 family of endoribonucleases generates functional CRISPR-derived RNAs by site-specific cleavage of repeat sequences in precursor transcripts. The structure of Cas6 [1] showed it adopts a tandem ferredoxin ...In Type I and III CRISPR/Cas systems, the Cas6 family of endoribonucleases generates functional CRISPR-derived RNAs by site-specific cleavage of repeat sequences in precursor transcripts. The structure of Cas6 [1] showed it adopts a tandem ferredoxin/RRM fold. This entry represents the N-terminal domain.
Domain