4C2E
Crystal structure of the protease CtpB(S309A) present in a resting state
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PDZ_2 | e4c2eA13 | A: beta barrels | X: PDZ domain (From Topology) | H: PDZ domain (From Topology) | T: PDZ domain | F: PDZ_2 | ECOD (1.6) |
A | PG_binding_1 | e4c2eA15 | A: alpha arrays | X: PGBD-like (From Topology) | H: PGBD-like (From Topology) | T: PGBD-like | F: PG_binding_1 | ECOD (1.6) |
A | Peptidase_S41_CPP | e4c2eA16 | A: alpha bundles | X: Tail specific protease helical domain (From Topology) | H: Tail specific protease helical domain (From Topology) | T: Tail specific protease helical domain | F: Peptidase_S41_CPP | ECOD (1.6) |
A | Peptidase_S41 | e4c2eA14 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: Peptidase_S41 | ECOD (1.6) |
B | PDZ_2 | e4c2eB7 | A: beta barrels | X: PDZ domain (From Topology) | H: PDZ domain (From Topology) | T: PDZ domain | F: PDZ_2 | ECOD (1.6) |
B | PG_binding_1 | e4c2eB2 | A: alpha arrays | X: PGBD-like (From Topology) | H: PGBD-like (From Topology) | T: PGBD-like | F: PG_binding_1 | ECOD (1.6) |
B | Peptidase_S41_CPP | e4c2eB8 | A: alpha bundles | X: Tail specific protease helical domain (From Topology) | H: Tail specific protease helical domain (From Topology) | T: Tail specific protease helical domain | F: Peptidase_S41_CPP | ECOD (1.6) |
B | Peptidase_S41 | e4c2eB4 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: Peptidase_S41 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF13180 | PDZ domain (PDZ_2) | PDZ domain | - | Domain | |
PF03572 | Peptidase family S41 (Peptidase_S41) | Peptidase family S41 | - | Family | |
PF01471 | Putative peptidoglycan binding domain (PG_binding_1) | Putative peptidoglycan binding domain | This domain is composed of three alpha helices [1]. This domain is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation [2]. This domain may have a general peptidoglycan binding function. This family is ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002477 | Peptidoglycan binding-like | Domain | |
IPR029045 | ClpP/crotonase-like domain superfamily | Homologous Superfamily | |
IPR036034 | PDZ superfamily | Homologous Superfamily | |
IPR036365 | PGBD-like superfamily | Homologous Superfamily | |
IPR005151 | Tail specific protease | Domain | |
IPR001478 | PDZ domain | Domain | |
IPR004447 | C-terminal-processing peptidase S41A | Family | |
IPR036366 | PGBD superfamily | Homologous Superfamily |