4BTP | pdb_00004btp

Structure of the capsid protein P1 of the bacteriophage phi8

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
J	Peptidase_M2	e4btpJ1	A: a/b three-layered sandwiches	X: HAMP domain	H: Metalloproteases (zincins) catalytic domain	T: Metalloproteases (zincins) catalytic domain	F: Peptidase_M2	ECOD (v294.1)
I	Peptidase_M2	e4btpI1	A: a/b three-layered sandwiches	X: HAMP domain	H: Metalloproteases (zincins) catalytic domain	T: Metalloproteases (zincins) catalytic domain	F: Peptidase_M2	ECOD (v294.1)
H	Peptidase_M2	e4btpH1	A: a/b three-layered sandwiches	X: HAMP domain	H: Metalloproteases (zincins) catalytic domain	T: Metalloproteases (zincins) catalytic domain	F: Peptidase_M2	ECOD (v294.1)
G	Peptidase_M2	e4btpG1	A: a/b three-layered sandwiches	X: HAMP domain	H: Metalloproteases (zincins) catalytic domain	T: Metalloproteases (zincins) catalytic domain	F: Peptidase_M2	ECOD (v294.1)
F	Peptidase_M2	e4btpF1	A: a/b three-layered sandwiches	X: HAMP domain	H: Metalloproteases (zincins) catalytic domain	T: Metalloproteases (zincins) catalytic domain	F: Peptidase_M2	ECOD (v294.1)
E	Peptidase_M2	e4btpE1	A: a/b three-layered sandwiches	X: HAMP domain	H: Metalloproteases (zincins) catalytic domain	T: Metalloproteases (zincins) catalytic domain	F: Peptidase_M2	ECOD (v294.1)
D	Peptidase_M2	e4btpD1	A: a/b three-layered sandwiches	X: HAMP domain	H: Metalloproteases (zincins) catalytic domain	T: Metalloproteases (zincins) catalytic domain	F: Peptidase_M2	ECOD (v294.1)
C	Peptidase_M2	e4btpC1	A: a/b three-layered sandwiches	X: HAMP domain	H: Metalloproteases (zincins) catalytic domain	T: Metalloproteases (zincins) catalytic domain	F: Peptidase_M2	ECOD (v294.1)
B	Peptidase_M2	e4btpB1	A: a/b three-layered sandwiches	X: HAMP domain	H: Metalloproteases (zincins) catalytic domain	T: Metalloproteases (zincins) catalytic domain	F: Peptidase_M2	ECOD (v294.1)
A	P1	e4btpA1	A: a/b three-layered sandwiches	X: beta-Grasp	H: Nudix	T: Nudix	F: P1	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	PF20837	Major inner capsid protein P1 (P1)	Major inner capsid protein P1	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	p1	identical protein binding protein binding binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR048856	Major inner capsid protein P1	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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