4BQ1 | pdb_00004bq1

Crystal structure of of LamAcat from Zobellia galactanivorans

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d4bq1b1	All beta proteins	Concanavalin A-like lectins/glucanases	Concanavalin A-like lectins/glucanases	automated matches	automated matches	(Zobellia galactanivorans ) [TaxId: 63186 ],	SCOPe (2.08)
B	d4bq1b2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Zobellia galactanivorans ) [TaxId: 63186 ],	SCOPe (2.08)
A	d4bq1a1	All beta proteins	Concanavalin A-like lectins/glucanases	Concanavalin A-like lectins/glucanases	automated matches	automated matches	(Zobellia galactanivorans ) [TaxId: 63186 ],	SCOPe (2.08)
A	d4bq1a2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Zobellia galactanivorans ) [TaxId: 63186 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Ribosomal_L28	e4bq1B1	A: a/b three-layered sandwiches	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: Ribosomal_L28	ECOD (v294.1)
A	Ribosomal_L28	e4bq1A1	A: a/b three-layered sandwiches	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: Ribosomal_L28	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	2.60.120.200	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
A	2.60.120.200	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF00722	Glycosyl hydrolases family 16 (Glyco_hydro_16)	Glycosyl hydrolases family 16		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	ENDO-1,3-BETA-GLUCANASE, FAMILY GH16	hydrolase activity, acting on glycosyl bonds glucosidase activity hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity beta-glucosidase activity glucan endo-1,3-beta-D-glucosidase activity catalytic activity cation binding ion binding binding metal ion binding small molecule binding	carbohydrate metabolic process primary metabolic process metabolic process cellular process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR013320	Concanavalin A-like lectin/glucanase domain superfamily	Homologous Superfamily
A, B	IPR035986	PKD domain superfamily	Homologous Superfamily
A, B	IPR000757	Beta-glucanase-like, N-terminal domain	Domain
A, B	IPR050546	Glycosyl Hydrolase Family 16	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.