Cladosporium fulvum LysM effector Ecp6 in complex with a beta-1,4- linked N-acetyl-D-glucosamine tetramer: I3C heavy atom derivative
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | ThiF, E1_4HB | e4b9hA2 | A: beta barrels | X: HAD domain-like | H: Class I glutamine amidotransferase-like | T: CheY-like | F: ThiF, E1_4HB | ECOD (v294.2) |
| A | WD40 | e4b9hA3 | A: beta barrels | X: Trefoil/Plexin domain-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: WD40 | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.10.350.10 | Alpha Beta | Roll | Membrane-bound Lytic Murein Transglycosylase D | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01476 | LysM domain (LysM) | LysM domain | The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation [1]. This domain may have a general peptidoglycan binding function. The structure of this domain is known [2]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| EXTRACELLULAR PROTEIN 6 | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR036779 | LysM domain superfamily | Homologous Superfamily | |
| IPR018392 | LysM domain | Domain |














