4AV7 | pdb_00004av7

Structure determination of the double mutant S233Y F250G from the sec- alkyl sulfatase PisA1

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
F	d4av7f2	Alpha and beta proteins (a+b)	SCP-like	SCP-like	automated matches	automated matches	(Pseudomonas sp. DSM 6611 ) [TaxId: 1007495 ],	SCOPe (2.08)
F	d4av7f1	Alpha and beta proteins (a+b)	Metallo-hydrolase/oxidoreductase	Metallo-hydrolase/oxidoreductase	automated matches	automated matches	(Pseudomonas sp. DSM 6611 ) [TaxId: 1007495 ],	SCOPe (2.08)
F	d4av7f3	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Pseudomonas sp. DSM 6611 ) [TaxId: 1007495 ],	SCOPe (2.08)
E	d4av7e2	Alpha and beta proteins (a+b)	SCP-like	SCP-like	automated matches	automated matches	(Pseudomonas sp. DSM 6611 ) [TaxId: 1007495 ],	SCOPe (2.08)
E	d4av7e1	Alpha and beta proteins (a+b)	Metallo-hydrolase/oxidoreductase	Metallo-hydrolase/oxidoreductase	automated matches	automated matches	(Pseudomonas sp. DSM 6611 ) [TaxId: 1007495 ],	SCOPe (2.08)
E	d4av7e3	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Pseudomonas sp. DSM 6611 ) [TaxId: 1007495 ],	SCOPe (2.08)
D	d4av7d2	Alpha and beta proteins (a+b)	SCP-like	SCP-like	automated matches	automated matches	(Pseudomonas sp. DSM 6611 ) [TaxId: 1007495 ],	SCOPe (2.08)
D	d4av7d1	Alpha and beta proteins (a+b)	Metallo-hydrolase/oxidoreductase	Metallo-hydrolase/oxidoreductase	automated matches	automated matches	(Pseudomonas sp. DSM 6611 ) [TaxId: 1007495 ],	SCOPe (2.08)
D	d4av7d3	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Pseudomonas sp. DSM 6611 ) [TaxId: 1007495 ],	SCOPe (2.08)
C	d4av7c2	Alpha and beta proteins (a+b)	SCP-like	SCP-like	automated matches	automated matches	(Pseudomonas sp. DSM 6611 ) [TaxId: 1007495 ],	SCOPe (2.08)
C	d4av7c1	Alpha and beta proteins (a+b)	Metallo-hydrolase/oxidoreductase	Metallo-hydrolase/oxidoreductase	automated matches	automated matches	(Pseudomonas sp. DSM 6611 ) [TaxId: 1007495 ],	SCOPe (2.08)
C	d4av7c3	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Pseudomonas sp. DSM 6611 ) [TaxId: 1007495 ],	SCOPe (2.08)
B	d4av7b2	Alpha and beta proteins (a+b)	SCP-like	SCP-like	automated matches	automated matches	(Pseudomonas sp. DSM 6611 ) [TaxId: 1007495 ],	SCOPe (2.08)
B	d4av7b1	Alpha and beta proteins (a+b)	Metallo-hydrolase/oxidoreductase	Metallo-hydrolase/oxidoreductase	automated matches	automated matches	(Pseudomonas sp. DSM 6611 ) [TaxId: 1007495 ],	SCOPe (2.08)
B	d4av7b3	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Pseudomonas sp. DSM 6611 ) [TaxId: 1007495 ],	SCOPe (2.08)
A	d4av7a2	Alpha and beta proteins (a+b)	SCP-like	SCP-like	automated matches	automated matches	(Pseudomonas sp. DSM 6611 ) [TaxId: 1007495 ],	SCOPe (2.08)
A	d4av7a1	Alpha and beta proteins (a+b)	Metallo-hydrolase/oxidoreductase	Metallo-hydrolase/oxidoreductase	automated matches	automated matches	(Pseudomonas sp. DSM 6611 ) [TaxId: 1007495 ],	SCOPe (2.08)
A	d4av7a3	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Pseudomonas sp. DSM 6611 ) [TaxId: 1007495 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F	Alkyl_sulf_dimr	e4av7F4	A: alpha superhelices	X: Repetitive alpha hairpins	H: Alkylsulfatase SdsA1 linker domain (From Topology)	T: Alkylsulfatase SdsA1 linker domain	F: Alkyl_sulf_dimr	ECOD (1.6)
F	Alkyl_sulf_C	e4av7F3	A: a+b two layers	X: Sterol carrier protein-like	H: Sterol carrier protein, SCP-related (From Topology)	T: Sterol carrier protein, SCP-related	F: Alkyl_sulf_C	ECOD (1.6)
F	Lactamase_B	e4av7F5	A: a+b four layers	X: Metallo-hydrolase/oxidoreductase (From Topology)	H: Metallo-hydrolase/oxidoreductase (From Topology)	T: Metallo-hydrolase/oxidoreductase	F: Lactamase_B	ECOD (1.6)
E	Alkyl_sulf_dimr	e4av7E4	A: alpha superhelices	X: Repetitive alpha hairpins	H: Alkylsulfatase SdsA1 linker domain (From Topology)	T: Alkylsulfatase SdsA1 linker domain	F: Alkyl_sulf_dimr	ECOD (1.6)
E	Alkyl_sulf_C	e4av7E3	A: a+b two layers	X: Sterol carrier protein-like	H: Sterol carrier protein, SCP-related (From Topology)	T: Sterol carrier protein, SCP-related	F: Alkyl_sulf_C	ECOD (1.6)
E	Lactamase_B	e4av7E5	A: a+b four layers	X: Metallo-hydrolase/oxidoreductase (From Topology)	H: Metallo-hydrolase/oxidoreductase (From Topology)	T: Metallo-hydrolase/oxidoreductase	F: Lactamase_B	ECOD (1.6)
D	Alkyl_sulf_dimr	e4av7D4	A: alpha superhelices	X: Repetitive alpha hairpins	H: Alkylsulfatase SdsA1 linker domain (From Topology)	T: Alkylsulfatase SdsA1 linker domain	F: Alkyl_sulf_dimr	ECOD (1.6)
D	Alkyl_sulf_C	e4av7D3	A: a+b two layers	X: Sterol carrier protein-like	H: Sterol carrier protein, SCP-related (From Topology)	T: Sterol carrier protein, SCP-related	F: Alkyl_sulf_C	ECOD (1.6)
D	Lactamase_B	e4av7D5	A: a+b four layers	X: Metallo-hydrolase/oxidoreductase (From Topology)	H: Metallo-hydrolase/oxidoreductase (From Topology)	T: Metallo-hydrolase/oxidoreductase	F: Lactamase_B	ECOD (1.6)
C	Alkyl_sulf_dimr	e4av7C4	A: alpha superhelices	X: Repetitive alpha hairpins	H: Alkylsulfatase SdsA1 linker domain (From Topology)	T: Alkylsulfatase SdsA1 linker domain	F: Alkyl_sulf_dimr	ECOD (1.6)
C	Alkyl_sulf_C	e4av7C3	A: a+b two layers	X: Sterol carrier protein-like	H: Sterol carrier protein, SCP-related (From Topology)	T: Sterol carrier protein, SCP-related	F: Alkyl_sulf_C	ECOD (1.6)
C	Lactamase_B	e4av7C5	A: a+b four layers	X: Metallo-hydrolase/oxidoreductase (From Topology)	H: Metallo-hydrolase/oxidoreductase (From Topology)	T: Metallo-hydrolase/oxidoreductase	F: Lactamase_B	ECOD (1.6)
B	Alkyl_sulf_dimr	e4av7B4	A: alpha superhelices	X: Repetitive alpha hairpins	H: Alkylsulfatase SdsA1 linker domain (From Topology)	T: Alkylsulfatase SdsA1 linker domain	F: Alkyl_sulf_dimr	ECOD (1.6)
B	Alkyl_sulf_C	e4av7B2	A: a+b two layers	X: Sterol carrier protein-like	H: Sterol carrier protein, SCP-related (From Topology)	T: Sterol carrier protein, SCP-related	F: Alkyl_sulf_C	ECOD (1.6)
B	Lactamase_B	e4av7B3	A: a+b four layers	X: Metallo-hydrolase/oxidoreductase (From Topology)	H: Metallo-hydrolase/oxidoreductase (From Topology)	T: Metallo-hydrolase/oxidoreductase	F: Lactamase_B	ECOD (1.6)
A	Alkyl_sulf_dimr	e4av7A4	A: alpha superhelices	X: Repetitive alpha hairpins	H: Alkylsulfatase SdsA1 linker domain (From Topology)	T: Alkylsulfatase SdsA1 linker domain	F: Alkyl_sulf_dimr	ECOD (1.6)
A	Alkyl_sulf_C	e4av7A3	A: a+b two layers	X: Sterol carrier protein-like	H: Sterol carrier protein, SCP-related (From Topology)	T: Sterol carrier protein, SCP-related	F: Alkyl_sulf_C	ECOD (1.6)
A	Lactamase_B	e4av7A5	A: a+b four layers	X: Metallo-hydrolase/oxidoreductase (From Topology)	H: Metallo-hydrolase/oxidoreductase (From Topology)	T: Metallo-hydrolase/oxidoreductase	F: Lactamase_B	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
F	3.60.15.30	Alpha Beta	4-Layer Sandwich	Metallo-beta-lactamase	Chain A	CATH (4.3.0)
F	1.25.40.880	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat	Alkyl sulfatase, dimerisation domain	CATH (4.3.0)
F	3.30.1050.10	Alpha Beta	2-Layer Sandwich	Nonspecific Lipid-transfer Protein	Chain A	CATH (4.3.0)
E	3.60.15.30	Alpha Beta	4-Layer Sandwich	Metallo-beta-lactamase	Chain A	CATH (4.3.0)
E	1.25.40.880	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat	Alkyl sulfatase, dimerisation domain	CATH (4.3.0)
E	3.30.1050.10	Alpha Beta	2-Layer Sandwich	Nonspecific Lipid-transfer Protein	Chain A	CATH (4.3.0)
D	3.60.15.30	Alpha Beta	4-Layer Sandwich	Metallo-beta-lactamase	Chain A	CATH (4.3.0)
D	1.25.40.880	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat	Alkyl sulfatase, dimerisation domain	CATH (4.3.0)
D	3.30.1050.10	Alpha Beta	2-Layer Sandwich	Nonspecific Lipid-transfer Protein	Chain A	CATH (4.3.0)
C	3.60.15.30	Alpha Beta	4-Layer Sandwich	Metallo-beta-lactamase	Chain A	CATH (4.3.0)
C	1.25.40.880	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat	Alkyl sulfatase, dimerisation domain	CATH (4.3.0)
C	3.30.1050.10	Alpha Beta	2-Layer Sandwich	Nonspecific Lipid-transfer Protein	Chain A	CATH (4.3.0)
B	3.60.15.30	Alpha Beta	4-Layer Sandwich	Metallo-beta-lactamase	Chain A	CATH (4.3.0)
B	1.25.40.880	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat	Alkyl sulfatase, dimerisation domain	CATH (4.3.0)
B	3.30.1050.10	Alpha Beta	2-Layer Sandwich	Nonspecific Lipid-transfer Protein	Chain A	CATH (4.3.0)
A	3.60.15.30	Alpha Beta	4-Layer Sandwich	Metallo-beta-lactamase	Chain A	CATH (4.3.0)
A	1.25.40.880	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat	Alkyl sulfatase, dimerisation domain	CATH (4.3.0)
A	3.30.1050.10	Alpha Beta	2-Layer Sandwich	Nonspecific Lipid-transfer Protein	Chain A	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF14863	Alkyl sulfatase dimerisation (Alkyl_sulf_dimr)	Alkyl sulfatase dimerisation	-	Repeat
A, B, C, D, E A, B, C, D, E, F	PF14864	Alkyl sulfatase C-terminal (Alkyl_sulf_C)	Alkyl sulfatase C-terminal	This domain is found at the C-terminus of alkyl sulfatases. Together with the N-terminal catalytic domain, this domain forms a hydrophobic chute and may recruit hydrophobic substrates [1].	Domain
A, B, C, D, E A, B, C, D, E, F	PF00753	Metallo-beta-lactamase superfamily (Lactamase_B)	Metallo-beta-lactamase superfamily		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	SEC-ALKYLSULFATASE	linear primary-alkylsulfatase activity hydrolase activity, acting on ester bonds hydrolase activity catalytic activity sulfuric ester hydrolase activity protein binding binding protein dimerization activity cation binding ion binding metal ion binding small molecule binding	cellular response to stimulus response to stimulus oxoacid metabolic process cellular response to xenobiotic stimulus organic acid metabolic process xenobiotic metabolic process response to xenobiotic stimulus cellular response to chemical stimulus dodecyl sulfate metabolic process response to chemical sulfur compound metabolic process metabolic process cellular process small molecule metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR052195	Bacterial Alkyl/Aryl-Sulfatase	Family
A, B, C, D, E A, B, C, D, E, F	IPR029229	Alkyl sulfatase, C-terminal	Domain
A, B, C, D, E A, B, C, D, E, F	IPR036866	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR001279	Metallo-beta-lactamase	Domain
A, B, C, D, E A, B, C, D, E, F	IPR036527	SCP2 sterol-binding domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR029228	Alkyl sulfatase dimerisation domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR044097	Alkyl/aryl-sulfatase Bds1/ SdsA1 , MBL-fold	Domain
A, B, C, D, E A, B, C, D, E, F	IPR038536	Alkyl/aryl-sulfatase, dimerisation domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.