4AQF | pdb_00004aqf

X-ray crystallographic structure of Crimean-congo haemorrhagic fever virus nucleoprotein

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C	SCOP2B Superfamily	Nucleocapsid protein N-like	8052912	3002151	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Nucleocapsid protein N-like	8052912	3002151	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Nucleocapsid protein N-like	8052912	3002151	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	Nairo_nucleo	e4aqfC1	A: alpha complex topology	X: Nucleocapsid protein (From Topology)	H: Nucleocapsid protein (From Topology)	T: Nucleocapsid protein	F: Nairo_nucleo	ECOD (1.6)
B	Nairo_nucleo	e4aqfB1	A: alpha complex topology	X: Nucleocapsid protein (From Topology)	H: Nucleocapsid protein (From Topology)	T: Nucleocapsid protein	F: Nairo_nucleo	ECOD (1.6)
A	Nairo_nucleo	e4aqfA1	A: alpha complex topology	X: Nucleocapsid protein (From Topology)	H: Nucleocapsid protein (From Topology)	T: Nucleocapsid protein	F: Nairo_nucleo	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C	1.20.58.1110	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
B	1.20.58.1110	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
A	1.20.58.1110	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
C	PF02477	Nucleocapsid N protein (Nairo_nucleo)	Nucleocapsid N protein	-	Family
A, B	PF02477	Nucleocapsid N protein (Nairo_nucleo)	Nucleocapsid N protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C	NUCLEOPROTEIN	hydrolase activity catalytic activity RNA binding binding nucleic acid binding	-	protein-containing complex ribonucleoprotein complex viral nucleocapsid viral capsid virion component helical viral capsid
A, B	NUCLEOPROTEIN	hydrolase activity catalytic activity RNA binding binding nucleic acid binding	-	protein-containing complex ribonucleoprotein complex viral nucleocapsid viral capsid virion component helical viral capsid

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C	IPR003486	Nucleocapsid N protein	Family
A, B	IPR003486	Nucleocapsid N protein	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.