4AJV | pdb_00004ajv

Structure of mouse ZP-C domain of TGF-Beta-Receptor-3

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	ZP domain-like	8047455	4005646	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Zona pellucida-like domain (ZP domain / ZP-like domain / ZP module)	8052314	3002103	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Zona_pellucida_C	e4ajvA2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Zona_pellucida_C	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.40.4100	Mainly Beta	Sandwich	Immunoglobulin-like	Zona pellucida, ZP-C domain	CATH (4.2.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00100	ZP-C domain (Zona_pellucida)	ZP-C domain	This entry represents the ZP-C domain that is the C-terminal structural domain that composes the zona pellucida domain that was originally defined by sequence.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	TRANSFORMING GROWTH FACTOR BETA RECEPTOR TYPE 3	protein serine/threonine kinase activity molecular transducer activity catalytic activity, acting on a protein kinase activity protein kinase activity signaling receptor activity transferase activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups transmembrane receptor protein serine/threonine kinase activity transmembrane receptor protein kinase activity transmembrane signaling receptor activity catalytic activity transforming growth factor beta receptor activity protein serine/threonine kinase activity molecular transducer activity catalytic activity, acting on a protein kinase activity protein kinase activity signaling receptor activity transferase activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups transmembrane receptor protein serine/threonine kinase activity transmembrane receptor protein kinase activity transmembrane signaling receptor activity catalytic activity transforming growth factor beta receptor activity protein binding binding PDZ domain binding protein domain specific binding transforming growth factor beta binding growth factor binding cytokine binding SMAD binding glycosaminoglycan binding carbohydrate derivative binding	cellular response to stimulus positive regulation of cell communication cell surface receptor protein serine/threonine kinase signaling pathway regulation of cellular process positive regulation of signal transduction response to stimulus signaling regulation of transmembrane receptor protein serine/threonine kinase signaling pathway positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction intracellular signaling cassette cellular response to stimulus positive regulation of cell communication cell surface receptor protein serine/threonine kinase signaling pathway regulation of cellular process positive regulation of signal transduction response to stimulus signaling regulation of transmembrane receptor protein serine/threonine kinase signaling pathway positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction intracellular signaling cassette signal transduction enzyme-linked receptor protein signaling pathway positive regulation of cellular process regulation of biological process regulation of signaling cell surface receptor signaling pathway biological regulation positive regulation of intracellular signal transduction positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway SMAD protein signal transduction regulation of response to stimulus regulation of cell communication cellular process regulation of SMAD protein signal transduction positive regulation of SMAD protein signal transduction positive regulation of signaling developmental process heart development multicellular organismal process cardiac chamber morphogenesis animal organ development heart morphogenesis ventricular septum development circulatory system development multicellular organism development anatomical structure morphogenesis cardiac septum development cardiac septum morphogenesis ventricular septum morphogenesis cardiac chamber development anatomical structure development animal organ morphogenesis cardiac ventricle development system development cellular developmental process mesenchyme development tissue development epithelial to mesenchymal transition cell differentiation mesenchymal cell differentiation epicardial cell to mesenchymal cell transition heart growth cell population proliferation developmental growth cardiac muscle tissue development cardiac muscle cell proliferation growth organ growth striated muscle tissue development muscle cell proliferation cardiac muscle tissue growth muscle tissue development striated muscle cell proliferation regulation of growth positive regulation of cell population proliferation regulation of developmental process regulation of cardiac muscle tissue growth positive regulation of developmental process positive regulation of cardiac muscle cell proliferation regulation of organ growth regulation of heart growth regulation of cardiac muscle cell proliferation regulation of multicellular organismal process positive regulation of developmental growth positive regulation of heart growth regulation of multicellular organismal development regulation of developmental growth positive regulation of organ growth positive regulation of growth regulation of cell population proliferation positive regulation of cardiac muscle tissue growth positive regulation of multicellular organismal process embryo development ending in birth or egg hatching chordate embryonic development embryo development in utero embryonic development negative regulation of locomotion regulation of cell motility negative regulation of biological process tissue migration negative regulation of epithelial cell migration ameboidal-type cell migration regulation of cell migration negative regulation of cellular process cell migration epithelial cell migration cell motility regulation of epithelial cell migration locomotion negative regulation of cell migration epithelium migration regulation of locomotion negative regulation of cell motility negative regulation of multicellular organismal process secondary palate development roof of mouth development regulation of epithelial to mesenchymal transition regulation of cell differentiation negative regulation of cell differentiation negative regulation of developmental process negative regulation of epithelial to mesenchymal transition definitive hemopoiesis hemopoiesis cell development vasculature development blood vessel development negative regulation of cell population proliferation regulation of epithelial cell proliferation epithelial cell proliferation negative regulation of epithelial cell proliferation ventricular cardiac muscle tissue morphogenesis muscle structure development ventricular cardiac muscle tissue development muscle organ development muscle tissue morphogenesis tissue morphogenesis cardiac ventricle morphogenesis cardiac muscle tissue morphogenesis muscle organ morphogenesis apoptotic process involved in development apoptotic process involved in morphogenesis apoptotic process cell death programmed cell death cellular response to growth factor stimulus cellular response to transforming growth factor beta stimulus response to endogenous stimulus cellular response to endogenous stimulus response to transforming growth factor beta transforming growth factor beta receptor signaling pathway response to growth factor transforming growth factor beta receptor superfamily signaling pathway hepaticobiliary system development gland development liver development ossification osteoblast differentiation cellular response to BMP stimulus response to BMP BMP signaling pathway regulation of transforming growth factor beta receptor signaling pathway regulation of cellular response to transforming growth factor beta stimulus positive regulation of transforming growth factor beta receptor signaling pathway regulation of cellular response to growth factor stimulus positive regulation of cellular response to transforming growth factor beta stimulus epithelium development visceral serous pericardium development pericardium development heart trabecula morphogenesis trabecula morphogenesis blood vessel morphogenesis tube development vasculogenesis coronary vasculature development vasculogenesis involved in coronary vascular morphogenesis tube morphogenesis coronary vasculature morphogenesis homeostatic process erythrocyte differentiation definitive erythrocyte differentiation multicellular organismal-level homeostasis myeloid cell differentiation immune system process homeostasis of number of cells myeloid cell homeostasis erythrocyte homeostasis muscular septum morphogenesis heart trabecula formation anatomical structure formation involved in morphogenesis trabecula formation positive regulation of BMP signaling pathway regulation of BMP signaling pathway cardiac fibroblast cell differentiation cardiocyte differentiation epicardium-derived cardiac fibroblast cell differentiation cardiac fibroblast cell development epicardium-derived cardiac fibroblast cell development cardiac cell development blood vessel remodeling tissue remodeling collagen metabolic process metabolic process regulation of programmed cell death negative regulation of apoptotic process involved in morphogenesis negative regulation of programmed cell death regulation of apoptotic process regulation of apoptotic process involved in development negative regulation of apoptotic process involved in development negative regulation of apoptotic process regulation of apoptotic process involved in morphogenesis regulation of biosynthetic process negative regulation of metabolic process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of metabolic process negative regulation of macromolecule metabolic process regulation of tube diameter system process regulation of tube size circulatory system process vascular process in circulatory system blood vessel diameter maintenance regulation of biological quality blood circulation regulation of anatomical structure size ventricular compact myocardium morphogenesis blastocyst development outflow tract morphogenesis	cellular anatomical structure intracellular anatomical structure cytoplasm cell surface cell periphery plasma membrane membrane extracellular region membrane-bounded organelle intracellular organelle organelle endoplasmic reticulum intracellular membrane-bounded organelle endomembrane system

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR055355	ZP-C domain	Domain
A	IPR042235	Zona pellucida, ZP-C domain	Homologous Superfamily
A	IPR055356	ZP-N domain	Domain
A	IPR017977	Zona pellucida domain, conserved site	Conserved Site
A	IPR048290	Zona pellucida domain, chordate-type	Domain
A	IPR001507	Zona pellucida domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.