4ACK | pdb_00004ack

3D Structure of DotU from Francisella novicida

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyBacterial type VI secretion system component TssL-like 8053915 3002246 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyBacterial type VI secretion system component TssL-like 8053915 3002246 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BDotUe4ackB1 A: alpha bundlesX: Conserved type six secretion component TssL-related (From Topology)H: Conserved type six secretion component TssL-related (From Topology)T: Conserved type six secretion component TssL-relatedF: DotUECOD (1.6)
ADotUe4ackA1 A: alpha bundlesX: Conserved type six secretion component TssL-related (From Topology)H: Conserved type six secretion component TssL-related (From Topology)T: Conserved type six secretion component TssL-relatedF: DotUECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B1.25.40.590 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat Type IV / VI secretion system, DotUCATH (4.3.0)
A1.25.40.590 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat Type IV / VI secretion system, DotUCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF09850Type VI secretion system protein DotU (DotU)Type VI secretion system protein DotU- Family

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR038522Type IV / VI secretion system, DotU superfamilyHomologous Superfamily
A, B
IPR017732Type IV / VI secretion system, DotUDomain