3ZYS | pdb_00003zys

Human dynamin 1 deltaPRD polymer stabilized with GMPPCP


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyPH domain-like 8058467 3000134 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyPH domain-like 8058467 3000134 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyDynamin stalk-like 8054370 3002023 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CPNP_UDP_1e3zysC1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: PNP_UDP_1ECOD (v294.1)
FPNP_UDP_1e3zysF1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: PNP_UDP_1ECOD (v294.1)
Ee3zysE1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF:ECOD (v294.1)
BRibonuc_red_lgCe3zysB2 A: a/b three-layered sandwichesX: DEATH domainH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: Ribonuc_red_lgCECOD (v294.1)
DPNP_UDP_1e3zysD1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: PNP_UDP_1ECOD (v294.1)
APNP_UDP_1e3zysA1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: PNP_UDP_1ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C, F
PF00169PH domain (PH)PH domainPH stands for pleckstrin homology. Domain
A, D
PF01031Dynamin central region (Dynamin_M)Dynamin central region- Family
A, D
PF00350Dynamin family (Dynamin_N)Dynamin familyDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C, F
DYNAMIN-1
B, E
INTERFERON-INDUCED GTP-BINDING PROTEIN MX1
A, D
DYNAMIN-1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C, F
IPR020850GTPase effector domainDomain
C, F
IPR001849Pleckstrin homology domainDomain
C, F
IPR001401Dynamin, GTPase domainDomain
C, F
IPR045063Dynamin, N-terminalDomain
C, F
IPR030381Dynamin-type guanine nucleotide-binding (G) domainDomain
C, F
IPR011993PH-like domain superfamilyHomologous Superfamily
C, F
IPR019762Dynamin, GTPase region, conserved siteConserved Site
C, F
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
C, F
IPR003130Dynamin GTPase effectorDomain
C, F
IPR000375Dynamin stalk domainDomain
C, F
IPR022812DynaminFamily
B, E
IPR020850GTPase effector domainDomain
B, E
IPR001401Dynamin, GTPase domainDomain
B, E
IPR045063Dynamin, N-terminalDomain
B, E
IPR030381Dynamin-type guanine nucleotide-binding (G) domainDomain
B, E
IPR019762Dynamin, GTPase region, conserved siteConserved Site
B, E
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
B, E
IPR003130Dynamin GTPase effectorDomain
B, E
IPR000375Dynamin stalk domainDomain
B, E
IPR022812DynaminFamily
A, D
IPR020850GTPase effector domainDomain
A, D
IPR001849Pleckstrin homology domainDomain
A, D
IPR001401Dynamin, GTPase domainDomain
A, D
IPR045063Dynamin, N-terminalDomain
A, D
IPR030381Dynamin-type guanine nucleotide-binding (G) domainDomain
A, D
IPR011993PH-like domain superfamilyHomologous Superfamily
A, D
IPR019762Dynamin, GTPase region, conserved siteConserved Site
A, D
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A, D
IPR003130Dynamin GTPase effectorDomain
A, D
IPR000375Dynamin stalk domainDomain
A, D
IPR022812DynaminFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
C, F
PharosQ05193
B, E
PharosP20591
A, D
PharosQ05193