3RJ2

Structural and functional characterization of a novel histone H3 binding protein ORF158L from the Singapore grouper iridovirus (SGIV)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth X]SCOP2 FamilyORF158L-like8092772 4007780 SCOP2 (2022-06-29)
A [auth X]SCOP2 SuperfamilyInterferon antagonist C7-like8092773 3002619 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth X]PF21644e3rj2X1 A: beta sandwichesX: jelly-rollH: Histone H3 binding protein ORF158L (From Topology)T: Histone H3 binding protein ORF158LF: PF21644ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A [auth X]2.60.120.1150 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth X]PF21644Histone H3 binding protein ORF158L-like (ORF158L-like)Histone H3 binding protein ORF158L-likeThis domain family is found in Swiss:Q5YFA7 from Singapore grouper iridovirus (ORF158L) and similar viral proteins. ORF158L interacts with the histone H3/H4 complex and H3. It may play a key role in histone H3 modulation and function as a histone H3 ...This domain family is found in Swiss:Q5YFA7 from Singapore grouper iridovirus (ORF158L) and similar viral proteins. ORF158L interacts with the histone H3/H4 complex and H3. It may play a key role in histone H3 modulation and function as a histone H3 chaperon. It folds into two beta-sheets that form an elongated beta-sandwich domain, and two short alpha-helices on one surface of the molecule with several loops between the secondary structures. The beta-sheets consist of four antiparallel beta-strands and five antiparallel beta-strands, respectively [1].
Domain

InterPro: Protein Family Classification InterPro Database Homepage