3P3V
Crystal structure of a PTS dependent N-acetyl-galactosamine-IIB component (agaV, SPy_0631) from Streptococcus pyogenes at 1.65 A resolution
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d3p3vb1 | Alpha and beta proteins (a/b) | PTS IIb component | PTS IIb component | automated matches | automated matches | (Streptococcus pyogenes serotype M1 ) [TaxId: 301447 ], | SCOPe (2.08) |
B | d3p3vb2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Streptococcus pyogenes serotype M1 ) [TaxId: 301447 ], | SCOPe (2.08) |
A | d3p3va_ | Alpha and beta proteins (a/b) | PTS IIb component | PTS IIb component | automated matches | automated matches | (Streptococcus pyogenes serotype M1 ) [TaxId: 301447 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | PF03830 | e3p3vB1 | A: a/b three-layered sandwiches | X: PTS IIb component (From Topology) | H: PTS IIb component (From Topology) | T: PTS IIb component | F: PF03830 | ECOD (1.6) |
A | PF03830 | e3p3vA1 | A: a/b three-layered sandwiches | X: PTS IIb component (From Topology) | H: PTS IIb component (From Topology) | T: PTS IIb component | F: PF03830 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 3.40.35.10 | Alpha Beta | 3-Layer(aba) Sandwich | Fructose Permease | Phosphotransferase system, sorbose subfamily IIB component | CATH (4.3.0) |
A | 3.40.35.10 | Alpha Beta | 3-Layer(aba) Sandwich | Fructose Permease | Phosphotransferase system, sorbose subfamily IIB component | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03830 | PTS system sorbose subfamily IIB component (PTSIIB_sorb) | PTS system sorbose subfamily IIB component | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036667 | Phosphotransferase system, sorbose subfamily IIB component superfamily | Homologous Superfamily | |
IPR004720 | Phosphotransferase system, sorbose subfamily IIB component | Domain |