3MQ1

Crystal Structure of Dust Mite Allergen Der p 5

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Blo t 5 dust mite allergen-like	8053434	3002185	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Blo t 5 dust mite allergen-like	8053434	3002185	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Blo t 5 dust mite allergen-like	8053434	3002185	SCOP2B (2022-06-29)
D	SCOP2 Family	Blo t 5 dust mite allergen-like	8046820	4005314	SCOP2 (2022-06-29)
D	SCOP2 Superfamily	Blo t 5 dust mite allergen-like	8053434	3002185	SCOP2 (2022-06-29)
E	SCOP2B Superfamily	Blo t 5 dust mite allergen-like	8053434	3002185	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Blo t 5 dust mite allergen-like	8053434	3002185	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Blo-t-5	e3mq1A1	A: alpha bundles	X: YvfG-like	H: Mite allergen Der p 5-related (From Topology)	T: Mite allergen Der p 5-related	F: Blo-t-5	ECOD (1.6)
B	Blo-t-5	e3mq1B1	A: alpha bundles	X: YvfG-like	H: Mite allergen Der p 5-related (From Topology)	T: Mite allergen Der p 5-related	F: Blo-t-5	ECOD (1.6)
C	Blo-t-5	e3mq1C1	A: alpha bundles	X: YvfG-like	H: Mite allergen Der p 5-related (From Topology)	T: Mite allergen Der p 5-related	F: Blo-t-5	ECOD (1.6)
D	Blo-t-5	e3mq1D1	A: alpha bundles	X: YvfG-like	H: Mite allergen Der p 5-related (From Topology)	T: Mite allergen Der p 5-related	F: Blo-t-5	ECOD (1.6)
E	Blo-t-5	e3mq1E1	A: alpha bundles	X: YvfG-like	H: Mite allergen Der p 5-related (From Topology)	T: Mite allergen Der p 5-related	F: Blo-t-5	ECOD (1.6)
F	Blo-t-5	e3mq1F1	A: alpha bundles	X: YvfG-like	H: Mite allergen Der p 5-related (From Topology)	T: Mite allergen Der p 5-related	F: Blo-t-5	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.20.58.970	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
B	1.20.58.970	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
C	1.20.58.970	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
D	1.20.58.970	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
E	1.20.58.970	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
F	1.20.58.970	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF11642	Mite allergen Blo t 5 (Blo-t-5)	Mite allergen Blo t 5	This family of proteins is Blo t 5, an allergen protein from Blomia tropicalis mites. This protein shoes strong reactivity with IgE in asthmatic and rhinitis patients.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	Mite allergen Der p 5	identical protein binding protein binding binding protein homodimerization activity protein dimerization activity	cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein complex oligomerization protein-containing complex assembly cellular process cellular component organization or biogenesis	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR038455	Mite allergen, group 5/21 superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR020306	Mite allergen, group 5/21	Family

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.