Crystal structure of protein with unknown function from DUF364 family (ZP_00559375.1) from Desulfitobacterium hafniense DCB-2 at 2.01 A resolution
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d3l5ob1 | Alpha and beta proteins (a/b) | PLP-dependent transferase-like | Dhaf3308-like | Dhaf3308-like | Hypothetical protein Dhaf_3308 | (Desulfitobacterium hafniense DCB-2 ) [TaxId: 272564 ], | SCOPe (2.08) |
| B | d3l5ob2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Desulfitobacterium hafniense DCB-2 ) [TaxId: 272564 ], | SCOPe (2.08) |
| A | d3l5oa1 | Alpha and beta proteins (a/b) | PLP-dependent transferase-like | Dhaf3308-like | Dhaf3308-like | Hypothetical protein Dhaf_3308 | (Desulfitobacterium hafniense DCB-2 ) [TaxId: 272564 ], | SCOPe (2.08) |
| A | d3l5oa2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Desulfitobacterium hafniense DCB-2 ) [TaxId: 272564 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2B Superfamily | Dhaf3308 N-terminal domain-like | 8049426 | 3002375 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Dhaf3308 C-terminal domain-like | 8034144 | 3001143 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | Dhaf3308-like | 8021764 | 4002362 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Dhaf3308 C-terminal domain-like | 8034144 | 3001143 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Dhaf3308 N-terminal domain-like | 8049426 | 3002375 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | DUF4213 | e3l5oB2 | A: a+b two layers | X: Enolase-N/ribosomal protein | H: Dhaf4260 N-terminal domain (From Topology) | T: Dhaf4260 N-terminal domain | F: DUF4213 | ECOD (1.6) |
| B | DUF364 | e3l5oB1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: DUF364 | ECOD (1.6) |
| A | DUF4213 | e3l5oA1 | A: a+b two layers | X: Enolase-N/ribosomal protein | H: Dhaf4260 N-terminal domain (From Topology) | T: Dhaf4260 N-terminal domain | F: DUF4213 | ECOD (1.6) |
| A | DUF364 | e3l5oA2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: DUF364 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.30.390.100 | Alpha Beta | 2-Layer Sandwich | Enolase-like | domain 1 | CATH (4.2.0) |
| B | 3.40.50.11590 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.2.0) | |
| A | 3.30.390.100 | Alpha Beta | 2-Layer Sandwich | Enolase-like | domain 1 | CATH (4.2.0) |
| A | 3.40.50.11590 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.2.0) |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR007161 | Putative heavy-metal chelation domain | Domain | |
| IPR025251 | Domain of unknown function DUF4213 | Domain |
