Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad3kqua2 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RNA helicase HCV helicase domain, C-terminal domain HCV (Hepatitis C virus (isolate Con1) ) [TaxId: 333284 ], SCOPe (2.08)
Ad3kqua1 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RNA helicase HCV helicase domain, N-terminal domain HCV (Hepatitis C virus (isolate Con1) ) [TaxId: 333284 ], SCOPe (2.08)
Ad3kqua3 Artifacts Tags Tags Tags C-terminal Tags HCV (Hepatitis C virus (isolate Con1) ) [TaxId: 333284 ], SCOPe (2.08)
Bd3kqub2 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RNA helicase HCV helicase domain, C-terminal domain HCV (Hepatitis C virus (isolate Con1) ) [TaxId: 333284 ], SCOPe (2.08)
Bd3kqub1 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RNA helicase HCV helicase domain, N-terminal domain HCV (Hepatitis C virus (isolate Con1) ) [TaxId: 333284 ], SCOPe (2.08)
Bd3kqub3 Artifacts Tags Tags Tags C-terminal Tags HCV (Hepatitis C virus (isolate Con1) ) [TaxId: 333284 ], SCOPe (2.08)
Cd3kquc2 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RNA helicase HCV helicase domain, C-terminal domain HCV (Hepatitis C virus (isolate Con1) ) [TaxId: 333284 ], SCOPe (2.08)
Cd3kquc1 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RNA helicase HCV helicase domain, N-terminal domain HCV (Hepatitis C virus (isolate Con1) ) [TaxId: 333284 ], SCOPe (2.08)
Cd3kquc3 Artifacts Tags Tags Tags C-terminal Tags HCV (Hepatitis C virus (isolate Con1) ) [TaxId: 333284 ], SCOPe (2.08)
Dd3kqud2 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RNA helicase HCV helicase domain, C-terminal domain HCV (Hepatitis C virus (isolate Con1) ) [TaxId: 333284 ], SCOPe (2.08)
Dd3kqud1 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RNA helicase HCV helicase domain, N-terminal domain HCV (Hepatitis C virus (isolate Con1) ) [TaxId: 333284 ], SCOPe (2.08)
Dd3kqud3 Artifacts Tags Tags Tags C-terminal Tags HCV (Hepatitis C virus (isolate Con1) ) [TaxId: 333284 ], SCOPe (2.08)
Ed3kque2 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RNA helicase HCV helicase domain, C-terminal domain HCV (Hepatitis C virus (isolate Con1) ) [TaxId: 333284 ], SCOPe (2.08)
Ed3kque1 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RNA helicase HCV helicase domain, N-terminal domain HCV (Hepatitis C virus (isolate Con1) ) [TaxId: 333284 ], SCOPe (2.08)
Ed3kque3 Artifacts Tags Tags Tags C-terminal Tags HCV (Hepatitis C virus (isolate Con1) ) [TaxId: 333284 ], SCOPe (2.08)
Fd3kquf2 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RNA helicase HCV helicase domain, C-terminal domain HCV (Hepatitis C virus (isolate Con1) ) [TaxId: 333284 ], SCOPe (2.08)
Fd3kquf1 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RNA helicase HCV helicase domain, N-terminal domain HCV (Hepatitis C virus (isolate Con1) ) [TaxId: 333284 ], SCOPe (2.08)
Fd3kquf3 Artifacts Tags Tags Tags C-terminal Tags HCV (Hepatitis C virus (isolate Con1) ) [TaxId: 333284 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AEUF07999e3kquA5 A: alpha arraysX: C-terminal helical domain of RNA helicase (From Topology)H: C-terminal helical domain of RNA helicase (From Topology)T: C-terminal helical domain of RNA helicaseF: EUF07999ECOD (1.6)
AHelicase_C_7e3kquA4 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Helicase_C_7ECOD (1.6)
ADEAD_3e3kquA2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: DEAD_3ECOD (1.6)
BEUF07999e3kquB5 A: alpha arraysX: C-terminal helical domain of RNA helicase (From Topology)H: C-terminal helical domain of RNA helicase (From Topology)T: C-terminal helical domain of RNA helicaseF: EUF07999ECOD (1.6)
BHelicase_C_7e3kquB4 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Helicase_C_7ECOD (1.6)
BDEAD_3e3kquB2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: DEAD_3ECOD (1.6)
CEUF07999e3kquC5 A: alpha arraysX: C-terminal helical domain of RNA helicase (From Topology)H: C-terminal helical domain of RNA helicase (From Topology)T: C-terminal helical domain of RNA helicaseF: EUF07999ECOD (1.6)
CHelicase_C_7e3kquC4 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Helicase_C_7ECOD (1.6)
CDEAD_3e3kquC2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: DEAD_3ECOD (1.6)
DEUF07999e3kquD5 A: alpha arraysX: C-terminal helical domain of RNA helicase (From Topology)H: C-terminal helical domain of RNA helicase (From Topology)T: C-terminal helical domain of RNA helicaseF: EUF07999ECOD (1.6)
DHelicase_C_7e3kquD4 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Helicase_C_7ECOD (1.6)
DDEAD_3e3kquD2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: DEAD_3ECOD (1.6)
EEUF07999e3kquE5 A: alpha arraysX: C-terminal helical domain of RNA helicase (From Topology)H: C-terminal helical domain of RNA helicase (From Topology)T: C-terminal helical domain of RNA helicaseF: EUF07999ECOD (1.6)
EHelicase_C_7e3kquE4 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Helicase_C_7ECOD (1.6)
EDEAD_3e3kquE2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: DEAD_3ECOD (1.6)
FEUF07999e3kquF5 A: alpha arraysX: C-terminal helical domain of RNA helicase (From Topology)H: C-terminal helical domain of RNA helicase (From Topology)T: C-terminal helical domain of RNA helicaseF: EUF07999ECOD (1.6)
FHelicase_C_7e3kquF4 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Helicase_C_7ECOD (1.6)
FDEAD_3e3kquF2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: DEAD_3ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF07652Flavivirus DEAD domain (Flavi_DEAD)Flavivirus DEAD domain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Serine protease/NTPase/helicase NS3
G [auth M],
H [auth N]
5'-D(*T*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR002522Hepatitis C virus, Core protein, N-terminalDomain
A, B, C, D, E
IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
A, B, C, D, E
IPR038568Hepatitis C virus NS5A, 1B domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A, B, C, D, E
IPR009003Peptidase S1, PA clanHomologous Superfamily
A, B, C, D, E
IPR001650Helicase, C-terminal domain-likeDomain
A, B, C, D, E
IPR014001Helicase superfamily 1/2, ATP-binding domainDomain
A, B, C, D, E
IPR002868Hepatitis C virus, Non-structural 5a proteinDomain
A, B, C, D, E
IPR038170NS5A domain 1a superfamilyHomologous Superfamily
A, B, C, D, E
IPR002518Hepatitis C virus, Non-structural protein NS2Domain
A, B, C, D, E
IPR013192Hepatitis C virus, Non-structural 5a protein, domain 1aDomain
A, B, C, D, E
IPR002521Hepatitis C virus, Core protein, C-terminalDomain
A, B, C, D, E
IPR042209Hepatitis C virus non-structural protein NS2, N-terminal domainHomologous Superfamily
A, B, C, D, E
IPR000745Hepatitis C virus, Non-structural protein NS4aDomain
A, B, C, D, E
IPR011492Non-structural protein NS3-like, DEAD box helicase, flavivirusDomain
A, B, C, D, E
IPR042205Hepatitis C virus non-structural protein NS2, C-terminal domainHomologous Superfamily
A, B, C, D, E
IPR002166RNA dependent RNA polymerase, hepatitis C virusFamily
A, B, C, D, E
IPR002519Hepatitis C virus, Envelope glycoprotein E1Domain
A, B, C, D, E
IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
A, B, C, D, E
IPR044896Hepatitis C virus core protein, chain A superfamilyHomologous Superfamily
A, B, C, D, E
IPR024350Hepatitus C virus, Non-structural 5a protein, C-terminalDomain
A, B, C, D, E
IPR013193Hepatitis C virus non-structural 5a, 1B domainDomain
A, B, C, D, E
IPR004109Hepatitis C virus, NS3 proteaseDomain
A, B, C, D, E
IPR002531Hepatitis C virus, Non-structural protein E2/NS1Domain
A, B, C, D, E
IPR043504Peptidase S1, PA clan, chymotrypsin-like foldHomologous Superfamily
A, B, C, D, E
IPR007094RNA-directed RNA polymerase, catalytic domainDomain
A, B, C, D, E
IPR001490Hepatitis C virus, Non-structural protein NS4bDomain