3K6O | pdb_00003k6o

Crystal structure of protein of unknown function DUF1344 (YP_001299214.1) from Bacteroides vulgatus ATCC 8482 at 2.00 A resolution

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyBacterial enterotoxins 8052343 3000434 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyCTD of NigD-like 8052342 3002106 SCOP2B (2022-06-29)
ASCOP2 FamilyCTD of NigD-like 8046950 4005383 SCOP2 (2022-06-29)
ASCOP2 FamilyNTD of NigD-like 8047776 4005812 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyCTD of NigD-like 8052342 3002106 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyBacterial enterotoxins 8052343 3000434 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BNigD_Ne3k6oB3 A: beta barrelsX: OB-foldH: OB domain in putative lipoprotein BF3042-related proteins (From Topology)T: OB domain in putative lipoprotein BF3042-related proteinsF: NigD_NECOD (1.6)
BNigD_Ce3k6oB2 A: beta sandwichesX: Ig-like domain in putative lipoprotein BF3042-related proteins (From Topology)H: Ig-like domain in putative lipoprotein BF3042-related proteins (From Topology)T: Ig-like domain in putative lipoprotein BF3042-related proteinsF: NigD_CECOD (1.6)
ANigD_Ne3k6oA2 A: beta barrelsX: OB-foldH: OB domain in putative lipoprotein BF3042-related proteins (From Topology)T: OB domain in putative lipoprotein BF3042-related proteinsF: NigD_NECOD (1.6)
ANigD_Ce3k6oA1 A: beta sandwichesX: Ig-like domain in putative lipoprotein BF3042-related proteins (From Topology)H: Ig-like domain in putative lipoprotein BF3042-related proteins (From Topology)T: Ig-like domain in putative lipoprotein BF3042-related proteinsF: NigD_CECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.40.50.500 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) NigD-like N-terminal OB domainCATH (4.3.0)
B2.60.40.2370 Mainly Beta Sandwich Immunoglobulin-like NigD-like, C-terminal beta sandwich domainCATH (4.3.0)
A2.40.50.500 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) NigD-like N-terminal OB domainCATH (4.3.0)
A2.60.40.2370 Mainly Beta Sandwich Immunoglobulin-like NigD-like, C-terminal beta sandwich domainCATH (4.3.0)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR038143NigD-like, C-terminal domain superfamilyHomologous Superfamily
A, B
IPR038179NigD-like, N-terminal domain superfamilyHomologous Superfamily
A, B
IPR035376NigD-like, C-terminal domainDomain
A, B
IPR024299NigD-like N-terminal OB domainDomain