3K6O | pdb_00003k6o

Crystal structure of protein of unknown function DUF1344 (YP_001299214.1) from Bacteroides vulgatus ATCC 8482 at 2.00 A resolution

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyBacterial enterotoxins 8052343 3000434 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyCTD of NigD-like 8052342 3002106 SCOP2B (2022-06-29)
ASCOP2 FamilyCTD of NigD-like 8046950 4005383 SCOP2 (2022-06-29)
ASCOP2 FamilyNTD of NigD-like 8047776 4005812 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyCTD of NigD-like 8052342 3002106 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyBacterial enterotoxins 8052343 3000434 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BPCIe3k6oB2 A: a/b three-layered sandwichesX: DEATH domainH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: PCIECOD (v294.1)
ASulfotransfer_3e3k6oA1 A: a/b three-layered sandwichesX: Long alpha-hairpinH: C-terminal UvrC-binding domain of UvrBT: C-terminal UvrC-binding domain of UvrBF: Sulfotransfer_3ECOD (v294.1)
Ae3k6oA2 A: a/b three-layered sandwichesX: Fusion glycoprotein F2H: HTHT: winged helix domainF:ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.40.50.500 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) NigD-like N-terminal OB domainCATH (4.3.0)
B2.60.40.2370 Mainly Beta Sandwich Immunoglobulin-like NigD-like, C-terminal beta sandwich domainCATH (4.3.0)
A2.40.50.500 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) NigD-like N-terminal OB domainCATH (4.3.0)
A2.60.40.2370 Mainly Beta Sandwich Immunoglobulin-like NigD-like, C-terminal beta sandwich domainCATH (4.3.0)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR038143NigD-like, C-terminal domain superfamilyHomologous Superfamily
A, B
IPR038179NigD-like, N-terminal domain superfamilyHomologous Superfamily
A, B
IPR035376NigD-like, C-terminal domainDomain
A, B
IPR024299NigD-like N-terminal OB domainDomain