3HRW | pdb_00003hrw

Crystal structure of hemoglobin from mouse (Mus musculus)at 2.8

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d3hrwa_	All alpha proteins	Globin-like	Globin-like	Globins	automated matches	(Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
C	d3hrwc_	All alpha proteins	Globin-like	Globin-like	Globins	automated matches	(Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
B	d3hrwb_	All alpha proteins	Globin-like	Globin-like	Globins	automated matches	(Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
D	d3hrwd_	All alpha proteins	Globin-like	Globin-like	Globins	automated matches	(Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Globins	8060947	4000551	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Globin-like	8060948	3000554	SCOP2 (2022-06-29)
C	SCOP2B Superfamily	Globin-like	8060948	3000554	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Globin-like	8036962	3000554	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Globin-like	8036962	3000554	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Glyco_hydro_3	e3hrwA1	A: a/b three-layered sandwiches	X: TIM beta/alpha-barrel	H: FAD-dependent thiol oxidase	T: FAD-dependent thiol oxidase	F: Glyco_hydro_3	ECOD (v294.1)
C	NUDIX	e3hrwC1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: Nudix	F: NUDIX	ECOD (v294.1)
B	Glyco_hydro_3	e3hrwB1	A: a/b three-layered sandwiches	X: TIM beta/alpha-barrel	H: FAD-dependent thiol oxidase	T: FAD-dependent thiol oxidase	F: Glyco_hydro_3	ECOD (v294.1)
D	NUDIX	e3hrwD1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: Nudix	F: NUDIX	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.490.10	Mainly Alpha	Orthogonal Bundle	Globin-like	Globins	CATH (4.3.0)
C	1.10.490.10	Mainly Alpha	Orthogonal Bundle	Globin-like	Globins	CATH (4.3.0)
B	1.10.490.10	Mainly Alpha	Orthogonal Bundle	Globin-like	Globins	CATH (4.3.0)
D	1.10.490.10	Mainly Alpha	Orthogonal Bundle	Globin-like	Globins	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, C	PF00042	Globin (Globin)	Globin		Domain
B, D	PF00042	Globin (Globin)	Globin		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, C	Hemoglobin subunit alpha	oxygen binding binding small molecule binding amyloid-beta binding peptide binding oxygen carrier activity molecular carrier activity tetrapyrrole binding heme binding cation binding transition metal ion binding iron ion binding ion binding metal ion binding oxygen binding binding small molecule binding amyloid-beta binding peptide binding oxygen carrier activity molecular carrier activity tetrapyrrole binding heme binding cation binding transition metal ion binding iron ion binding ion binding metal ion binding protein binding signaling receptor binding G protein-coupled receptor binding	oxygen transport localization transport gas transport establishment of localization response to stimulus response to chemical response to stilbenoid one-carbon compound transport carbon dioxide transport nitric oxide transport nitrogen compound transport developmental process multicellular organismal process oxygen transport localization transport gas transport establishment of localization response to stimulus response to chemical response to stilbenoid one-carbon compound transport carbon dioxide transport nitric oxide transport nitrogen compound transport developmental process multicellular organismal process erythrocyte development cellular developmental process homeostatic process hemopoiesis cell development erythrocyte differentiation multicellular organismal-level homeostasis myeloid cell differentiation immune system process cell differentiation anatomical structure development myeloid cell development homeostasis of number of cells cellular process myeloid cell homeostasis erythrocyte homeostasis biological process involved in interspecies interaction between organisms response to other organism response to bacterium response to external stimulus response to external biotic stimulus response to biotic stimulus cellular response to stimulus cellular detoxification cellular response to chemical stimulus detoxification cellular oxidant detoxification cellular response to toxic substance response to toxic substance multicellular organism development embryo development ending in birth or egg hatching chordate embryonic development embryo development in utero embryonic development	protein-containing complex cellular anatomical structure intracellular anatomical structure hemoglobin complex cytoplasm cytosol haptoglobin-hemoglobin complex myelin sheath
B, D	Hemoglobin subunit beta-1	oxygen binding binding small molecule binding hemoglobin binding protein binding hemoglobin alpha binding protein-containing complex binding oxygen carrier activity molecular carrier activity tetrapyrrole binding heme binding hemoglobin beta binding cation binding ion binding oxygen binding binding small molecule binding hemoglobin binding protein binding hemoglobin alpha binding protein-containing complex binding oxygen carrier activity molecular carrier activity tetrapyrrole binding heme binding hemoglobin beta binding cation binding ion binding metal ion binding	oxygen transport localization transport gas transport establishment of localization one-carbon compound transport carbon dioxide transport nitric oxide transport nitrogen compound transport developmental process multicellular organismal process erythrocyte development cellular developmental process homeostatic process oxygen transport localization transport gas transport establishment of localization one-carbon compound transport carbon dioxide transport nitric oxide transport nitrogen compound transport developmental process multicellular organismal process erythrocyte development cellular developmental process homeostatic process hemopoiesis cell development erythrocyte differentiation multicellular organismal-level homeostasis myeloid cell differentiation immune system process cell differentiation anatomical structure development myeloid cell development homeostasis of number of cells cellular process myeloid cell homeostasis erythrocyte homeostasis cellular response to stimulus cellular detoxification cellular response to chemical stimulus response to stimulus response to chemical detoxification cellular oxidant detoxification cellular response to toxic substance response to toxic substance	protein-containing complex cellular anatomical structure intracellular anatomical structure hemoglobin complex cytoplasm cytosol haptoglobin-hemoglobin complex myelin sheath

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, C	IPR050056	Hemoglobin and related oxygen transporters	Family
A, C	IPR002338	Hemoglobin, alpha-type	Family
A, C	IPR002339	Hemoglobin, pi	Family
A, C	IPR009050	Globin-like superfamily	Homologous Superfamily
A, C	IPR012292	Globin/Protoglobin	Homologous Superfamily
A, C	IPR000971	Globin	Domain
B, D	IPR050056	Hemoglobin and related oxygen transporters	Family
B, D	IPR009050	Globin-like superfamily	Homologous Superfamily
B, D	IPR012292	Globin/Protoglobin	Homologous Superfamily
B, D	IPR002337	Hemoglobin, beta-type	Family
B, D	IPR000971	Globin	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.